egeulgen / pathfindRLinks
pathfindR: Enrichment Analysis Utilizing Active Subnetworks
☆195Updated 3 weeks ago
Alternatives and similar repositories for pathfindR
Users that are interested in pathfindR are comparing it to the libraries listed below
Sorting:
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆176Updated 2 months ago
- Seurat meets tidyverse. The best of both worlds.☆161Updated this week
- Contribute Packages to Bioconductor☆145Updated 9 months ago
- Pretty heatmaps☆268Updated 7 months ago
- Make Interactive Complex Heatmaps☆138Updated last year
- MSigDB gene sets for multiple organisms in a tidy data format☆84Updated 5 months ago
- ☆26Updated 4 years ago
- Interactive Cytometry Data Analysis☆67Updated last month
- R/shiny interface for interactive visualization of data in SummarizedExperiment objects☆228Updated this week
- Visualise Clusterings at Different Resolutions☆247Updated 6 months ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆199Updated last year
- R data package for annotating/converting Gene IDs☆168Updated 6 months ago
- ☆342Updated 9 months ago
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆157Updated 3 weeks ago
- Publication-quality sequence logos in R☆226Updated last year
- Decorate a plot with associated information☆126Updated 4 months ago
- A grammar of genomic data transformation☆151Updated last month
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆95Updated last year
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated last month
- An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…☆111Updated 3 months ago
- Genomic Data Retrieval with R☆222Updated last month
- Visual self-service analytics platform for big omics data.☆128Updated last week
- R package to create cell pictures.☆136Updated 3 years ago
- Publication-ready volcano plots with enhanced colouring and labeling☆448Updated last month
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆112Updated 3 months ago
- Development repository for the Bioconductor package 'mixOmics '☆224Updated 8 months ago
- ggplot2 version of heatmap☆90Updated 2 years ago
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆122Updated 5 years ago
- Visualising data frames as funky heatmaps 📊☆190Updated last month
- Docker Containers for Bioconductor☆88Updated this week