DIA-NN - a universal automated software suite for DIA proteomics data analysis.
☆496Sep 16, 2026Updated last month
Alternatives and similar repositories for DiaNN
Users that are interested in DiaNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A cross-platform proteomics data analysis suite☆330Oct 24, 2026Updated 2 weeks ago
- Report processing and protein quantification for MS-based proteomics☆57Jun 29, 2023Updated 3 years ago
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆136Oct 29, 2026Updated last week
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆64Jul 15, 2026Updated 3 months ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆95Nov 17, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- modular & open DIA search☆119Updated this week
- Proteomics search & quantification so fast that it feels like magic☆318Oct 31, 2026Updated last week
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆34Oct 27, 2026Updated last week
- Deep learning framework for proteomics☆161Aug 31, 2026Updated 2 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆89Oct 9, 2026Updated 3 weeks ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆133Oct 22, 2026Updated 2 weeks ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆26Oct 24, 2026Updated last week
- A library for QC report based on MultiQC framework☆35Oct 29, 2026Updated last week
- Democratizing ML in proteomics☆58Oct 27, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A modular, python-based framework for mass spectrometry. Powered by nbdev.☆193Apr 19, 2024Updated 2 years ago
- R package - MSstats☆104Oct 4, 2026Updated last month
- MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.☆26May 23, 2026Updated 5 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆98Jun 3, 2026Updated 5 months ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆53Updated this week
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆253Oct 30, 2026Updated last week
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆60Oct 30, 2026Updated last week
- Infrastructure of AlphaX ecosystem☆60Updated this week
- Rescoring and spectral library generation pipeline for proteomics.☆62Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- This is a collection of minimal code to visualize various aspects of proteomics data.☆87Jan 6, 2022Updated 4 years ago
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆41Jun 3, 2026Updated 5 months ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆46May 9, 2026Updated 5 months ago
- quantms workflow for DIANN tool including DIA and DDA analysis☆19Updated this week
- ☆33Sep 24, 2026Updated last month
- An open-source Python package to unify raw MS data accession and storage.☆36Updated this week
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆69Oct 12, 2026Updated 3 weeks ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆206Updated this week
- The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis …☆324Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PDV: an integrative proteomics data viewer☆68Sep 22, 2026Updated last month
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆163Updated this week
- A list of tools on proteomics using deep learning☆111May 14, 2026Updated 5 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆56Oct 29, 2026Updated last week
- A search engine for the identification of cross-linked protein complexes or proteomes from mass spectrometry data.☆14Sep 17, 2026Updated last month
- ☆17Oct 22, 2026Updated 2 weeks ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆13Feb 8, 2021Updated 5 years ago