vdemichev / DiaNNLinks
DIA-NN - a universal automated software suite for DIA proteomics data analysis.
☆401Updated this week
Alternatives and similar repositories for DiaNN
Users that are interested in DiaNN are comparing it to the libraries listed below
Sorting:
- A cross-platform proteomics data analysis suite☆266Updated this week
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆123Updated 5 months ago
- Report processing and protein quantification for MS-based proteomics☆50Updated 2 years ago
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆231Updated last month
- This is a collection of minimal code to visualize various aspects of proteomics data.☆82Updated 3 years ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆89Updated 3 weeks ago
- A list of tools on proteomics using deep learning☆106Updated last year
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆60Updated 3 weeks ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆92Updated last week
- Deep learning framework for proteomics☆137Updated 3 weeks ago
- MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.☆21Updated last week
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆120Updated this week
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆98Updated 2 months ago
- Imputing proteomics data using deep learning models☆31Updated last month
- Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/☆289Updated 5 months ago
- Infrastructure of AlphaX ecosystem☆50Updated last week
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆78Updated 2 weeks ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆104Updated 2 weeks ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆40Updated 9 months ago
- Navigation links (and brief descriptions) to my repositories.☆12Updated 2 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆32Updated last month
- modular & open DIA search☆93Updated this week
- Community-curated tutorials and datasets for ML in proteomics☆55Updated last month
- PDV: an integrative proteomics data viewer☆58Updated 5 months ago
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Updated 10 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆52Updated last month
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated last week
- Proteomics search & quantification so fast that it feels like magic☆261Updated last week
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year