lgatto / MSnbaseLinks
Base Classes and Functions for Mass Spectrometry and Proteomics
☆134Updated 2 months ago
Alternatives and similar repositories for MSnbase
Users that are interested in MSnbase are comparing it to the libraries listed below
Sorting:
- R package - MSstats☆83Updated this week
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆58Updated 2 weeks ago
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆36Updated last year
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆45Updated 5 months ago
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆45Updated 4 months ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆93Updated 2 years ago
- Construct database and identify metabolites.☆5Updated 2 years ago
- This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis☆201Updated last week
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆88Updated 2 months ago
- Quantitative features for mass spectrometry data☆27Updated last month
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆33Updated 4 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆29Updated 11 months ago
- Low level infrastructure to handle MS spectra☆41Updated last month
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆39Updated 4 months ago
- An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.☆25Updated 3 months ago
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆13Updated 3 years ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated 2 years ago
- Differential Expression Analysis tool box R lang package for omics data☆45Updated 3 weeks ago
- R package for MetFrag☆24Updated 7 years ago
- asari, metabolomics data preprocessing☆50Updated 3 weeks ago
- Picotti lab data analysis package.☆62Updated 2 months ago
- tidymass☆56Updated last month
- An R package for non-targeted LC-MS metabolomics☆18Updated 9 months ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated this week
- ☆13Updated 3 years ago
- Report processing and protein quantification for MS-based proteomics☆46Updated last year
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 4 years ago
- Data Mining and Analysis of Lipidomics datasets in R☆30Updated 2 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated 2 years ago