lgatto / MSnbase
Base Classes and Functions for Mass Spectrometry and Proteomics
☆131Updated 3 weeks ago
Alternatives and similar repositories for MSnbase:
Users that are interested in MSnbase are comparing it to the libraries listed below
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆56Updated 4 months ago
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆42Updated 3 months ago
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆36Updated 11 months ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆93Updated last year
- R package - MSstats☆81Updated this week
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆45Updated last month
- Picotti lab data analysis package.☆62Updated last week
- This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis☆197Updated 3 weeks ago
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆12Updated 3 years ago
- Construct database and identify metabolites.☆5Updated 2 years ago
- Data Mining and Analysis of Lipidomics datasets in R☆30Updated last year
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆35Updated last month
- Quantitative features for mass spectrometry data☆27Updated last week
- Differential Expression Analysis tool box R lang package for omics data☆44Updated last week
- An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.☆25Updated 3 weeks ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆33Updated 4 years ago
- R package for MetFrag☆24Updated 7 years ago
- The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…☆41Updated 2 weeks ago
- asari, metabolomics data preprocessing☆47Updated this week
- The repo for LFQ-Analyst☆30Updated 8 months ago
- TimsR: Easy access to timsTOF Pro data from R.☆9Updated 3 years ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated 2 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆83Updated this week
- tidymass☆54Updated last year
- Chemical Similarity Enrichment analysis of metabolomics datasets☆28Updated 8 months ago
- Report processing and protein quantification for MS-based proteomics☆42Updated last year
- Retrieving Information of Proteins from Uniprot☆61Updated last year
- An R package for non-targeted LC-MS metabolomics☆18Updated 6 months ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated last month
- Workflow solutions for mass-spectrometry based non-target analysis.☆65Updated last week