ComputationalProteomics / NormalyzerDELinks
Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
☆26Updated 3 weeks ago
Alternatives and similar repositories for NormalyzerDE
Users that are interested in NormalyzerDE are comparing it to the libraries listed below
Sorting:
- Differential Expression Analysis tool box R lang package for omics data☆47Updated 3 weeks ago
- The repo for LFQ-Analyst☆30Updated last year
- R package for analysing proteomics data☆50Updated 2 years ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated 2 years ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 9 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated last month
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆99Updated 4 months ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆64Updated last month
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated last month
- tidymass☆59Updated 3 months ago
- R package - MSstats☆88Updated last week
- A tool for large scale omics datasets evaluation☆23Updated 2 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆30Updated last year
- DEP package☆30Updated 3 years ago
- ☆18Updated last month
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆36Updated 10 months ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 7 months ago
- Methods for label-free mass spectrometry proteomics☆15Updated 9 months ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆26Updated 6 years ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆51Updated 5 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- An r package for proteomics data Analysis, developed from DEP.☆34Updated 9 months ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 9 months ago
- A guide to running MaxQuant in Linux☆35Updated 5 years ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆40Updated 10 months ago
- Automated quantitative analysis of DIA proteomics mass spectrometry measurements.☆21Updated last year
- R package providing query functionality to BioMart instances like Ensembl☆43Updated 2 months ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆32Updated 2 years ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆38Updated last year
- ☆49Updated 3 years ago