ComputationalProteomics / NormalyzerDELinks
Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
☆25Updated 3 months ago
Alternatives and similar repositories for NormalyzerDE
Users that are interested in NormalyzerDE are comparing it to the libraries listed below
Sorting:
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated last year
- Differential Expression Analysis tool box R lang package for omics data☆46Updated last week
- The repo for LFQ-Analyst☆30Updated last year
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 5 months ago
- R package for analysing proteomics data☆49Updated 2 years ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆96Updated 3 weeks ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated 3 months ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆62Updated 2 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated this week
- tidymass☆57Updated last month
- DEP package☆28Updated 2 years ago
- An r package for proteomics data Analysis, developed from DEP.☆30Updated 5 months ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 3 months ago
- A tool for large scale omics datasets evaluation☆25Updated 2 years ago
- ☆18Updated 3 weeks ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated last month
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆27Updated 9 months ago
- Methods for label-free mass spectrometry proteomics☆15Updated 5 months ago
- Shiny app for making and annotating Volcano plots☆24Updated last year
- R package - MSstats☆85Updated last week
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- Automated quantitative analysis of DIA proteomics mass spectrometry measurements.☆19Updated 8 months ago
- Quantitative features for mass spectrometry data☆27Updated 3 months ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆48Updated last month
- R package providing query functionality to BioMart instances like Ensembl☆43Updated this week
- R package for WebGestalt☆37Updated 4 months ago
- ☆49Updated 3 years ago
- Cancer Dependency Map package☆30Updated last year
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆39Updated 6 months ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 5 months ago