jpquast / protti

Related projects ⓘ

Alternatives and complementary repositories for protti

• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆25Updated last month
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆22Updated 4 years ago
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆37Updated 3 weeks ago
• Proteomicslab57357 / UniprotR
  Retrieving Information of Proteins from Uniprot
  ☆59Updated 8 months ago
• ftwkoopmans / msdap
  MS-DAP: downstream analysis pipeline for quantitative proteomics
  ☆31Updated last month
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆40Updated 3 weeks ago
• jpquast / ggplate
  Create Layout Plots of Biological Culture Plates and Microplates
  ☆90Updated last month
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 3 years ago
• pnnl / leapR
  ☆17Updated 10 months ago
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆29Updated last year
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆48Updated last year
• broadinstitute / protigy
  Proteomics Toolset for Integrative Data Analysis
  ☆22Updated last year
• Vitek-Lab / MSstats
  R package - MSstats
  ☆74Updated this week
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆26Updated last year
• statOmics / MSqRob
  Robust statistical inference for quantitative LC-MS proteomics
  ☆33Updated last year
• Vitek-Lab / MSstatsTMT
  R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …
  ☆26Updated last week
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆34Updated 8 months ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 4 months ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆34Updated last month
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆42Updated this week
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆28Updated 3 months ago
• lgatto / RforProteomics
  Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
  ☆88Updated last year
• tidymass / tidymass
  tidymass
  ☆53Updated 10 months ago
• wenbostar / metaX
  metaX: a flexible and comprehensive software for processing omics data.
  ☆23Updated last year
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated 11 months ago
• jaspershen / metID
  Construct database and identify metabolites.
  ☆3Updated 2 years ago
• cbielow / PTXQC
  A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
  ☆42Updated 8 months ago
• smith-chem-wisc / MetaNetwork
  ☆9Updated last year
• ComputationalProteomics / NormalyzerDE
  Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
  ☆19Updated last month
• symbioticMe / proBatch
  Tools for Batch Effects Diagnostics and Correction
  ☆15Updated last year