ProtProtocols / IsoProtLinks
Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering
☆12Updated 6 years ago
Alternatives and similar repositories for IsoProt
Users that are interested in IsoProt are comparing it to the libraries listed below
Sorting:
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 8 months ago
- R package for analysing proteomics data☆50Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 2 weeks ago
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Updated 5 years ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated 2 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated 2 months ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆15Updated 7 years ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- R package for WebGestalt☆37Updated 2 weeks ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated last year
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- This is the ensembldb development repository.☆36Updated 4 months ago
- Proteomics label-free quantification (LFQ) analysis pipeline☆37Updated 11 months ago
- Snakemake pipeline for running MAJIQ☆23Updated 2 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆32Updated 9 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated this week
- interactive plots for differential expression analysis☆34Updated 6 months ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated last week
- DEP package☆30Updated 3 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- R package for WikiPathways API☆17Updated last month
- Visual exploratory analysis of gene expression data☆44Updated last month
- Molecular Signatures Database (MSigDB) in a tidy data frame☆26Updated 3 weeks ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated 2 weeks ago
- iread☆25Updated 4 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Updated 5 years ago
- A tool for large scale omics datasets evaluation☆23Updated 2 years ago