Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering
☆12May 4, 2019Updated 7 years ago
Alternatives and similar repositories for IsoProt
Users that are interested in IsoProt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- ☆15Jan 19, 2018Updated 8 years ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆23Apr 1, 2026Updated 4 months ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆18Feb 22, 2022Updated 4 years ago
- Methods for label-free mass spectrometry proteomics☆15May 13, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆12Oct 31, 2018Updated 7 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- Python script for analyzing the effect your fantasy schedule has on the league standings☆11Dec 7, 2018Updated 7 years ago
- Open source short linear motif discovery and sequence analysis☆29Sep 19, 2024Updated last year
- Integration ribosome profiling - mass spectrometry☆15Nov 4, 2025Updated 9 months ago
- A web app for exploratory data analysis of high-throughput screens (HTS)☆17Sep 19, 2018Updated 7 years ago
- Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing☆17Nov 29, 2022Updated 3 years ago
- MASIC generates selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in an LC-MS/MS analysis, characteri…☆18Dec 4, 2025Updated 8 months ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- i2dash: interactive and iterative dashboards.☆10Sep 5, 2023Updated 2 years ago
- ☆11Oct 10, 2018Updated 7 years ago
- ☆13Mar 19, 2024Updated 2 years ago
- [DEPRECATED] Docker containers for Bioconductor☆49Mar 15, 2023Updated 3 years ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆31Jul 21, 2026Updated 3 weeks ago
- bioscrape (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)☆16Jan 9, 2021Updated 5 years ago
- ☆16Jul 2, 2026Updated last month
- Repository of standardized biological experimental data and metadata☆16Jan 9, 2025Updated last year
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package for analysing proteomics data☆49Apr 17, 2023Updated 3 years ago
- Example of deploying an MVC application with app settings using the Azure Deploy Button☆13Apr 9, 2024Updated 2 years ago
- Short Time-series Expression Miner (STEM) and Dynamic Regulatory Events Miner (DREM)☆21Jun 16, 2026Updated last month
- 🦄 tmTheme and rstheme based on the `fairlyfloss` theme☆11Jan 7, 2020Updated 6 years ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- ☆20Sep 28, 2019Updated 6 years ago
- De-novo Assembly Structural Variant Caller☆13Sep 15, 2016Updated 9 years ago
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆67Aug 1, 2026Updated last week
- ☆28May 8, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- All JBrowse plugins created by Brigitte Hofmeister☆10Apr 27, 2018Updated 8 years ago
- Spatiotemporal Clustering and Inference of Omics Networks (SC-ION)☆12Oct 24, 2024Updated last year
- Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.☆40Feb 28, 2024Updated 2 years ago
- my code from working through Zed Shaw's book☆14May 5, 2016Updated 10 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated last month
- UBC R Study Group☆25Apr 22, 2022Updated 4 years ago
- Retrieving Information of Proteins from Uniprot☆74Mar 6, 2024Updated 2 years ago