Alternatives and similar repositories for IsoProt

Users that are interested in IsoProt are comparing it to the libraries listed below

• bartongroup / Proteus
  R package for analysing proteomics data
  ☆50Updated 2 years ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆30Updated 10 years ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆35Updated 3 weeks ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆23Updated last week
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆32Updated 10 months ago
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆47Updated last month
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆24Updated 9 months ago
• nf-core / proteomicslfq
  Proteomics label-free quantification (LFQ) analysis pipeline
  ☆37Updated last year
• asntech / intervene-shiny
  An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps
  ☆21Updated 7 years ago
• datapplab / SBGNview
  ☆29Updated 2 years ago
• pcastellanoescuder / POMA
  Omics Data Analysis Tools
  ☆14Updated last year
• szenitha / Shiny-Seq
  Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data
  ☆15Updated 8 years ago
• ToledoEM / msigdf
  Molecular Signatures Database (MSigDB) in a tidy data frame
  ☆26Updated 2 months ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago
• YuLab-SMU / ReactomePA
  Reactome Pathway Analysis
  ☆43Updated last month
• jorainer / ensembldb
  This is the ensembldb development repository.
  ☆36Updated 5 months ago
• UMMS-Biocore / debrowser
  Differential Count Data Analysis Toolbox
  ☆61Updated last year
• tgirke / systemPipeR
  Project Website:
  ☆54Updated this week
• mildpiggy / DEP2
  An r package for proteomics data Analysis, developed from DEP.
  ☆34Updated 10 months ago
• mtmorgan / AlphaMissenseR
  Accessing AlphaMissense Data Resources in R
  ☆13Updated 2 months ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated last year
• const-ae / proDA
  Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/
  ☆21Updated 2 years ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• 123xiaochen / VCFshiny
  ☆29Updated last year
• CapraLab / lab-manuscript-template
  An academic manuscript template with writing tips in both LaTeX and MS Word format generated by the Capra Lab (2/2022)
  ☆21Updated 2 years ago
• bzhanglab / WebGestaltR
  R package for WebGestalt
  ☆38Updated last month
• pnnl / leapR
  ☆18Updated last week