kkang7 / CDSeq_R_PackageLinks
CDSeq R Package
☆21Updated 6 months ago
Alternatives and similar repositories for CDSeq_R_Package
Users that are interested in CDSeq_R_Package are comparing it to the libraries listed below
Sorting:
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆93Updated 7 months ago
- Normalize CITEseq Data☆66Updated last month
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆41Updated 4 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last month
- scWGCNA☆61Updated 3 years ago
- ☆48Updated 11 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 2 weeks ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 3 months ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated 3 weeks ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 8 months ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- ☆32Updated 11 months ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆39Updated last week
- R package for Bioconductor submission☆37Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Single-cell Case Control Analysis☆52Updated last week
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- An R framework for choosing clustering parameters in scRNA-seq analysis pipelines☆36Updated 5 years ago
- R package for analysing single cell data☆59Updated 3 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆44Updated 3 years ago
- ☆60Updated 4 months ago
- mutation(barcode) caller for 10x single cell data☆44Updated 5 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- Tools for NanoString GeoMx Digital Spatial Profiler data for reading DCC and PKC files to NanoStringGeomxSet class, Normalization and QC.…☆46Updated 3 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 3 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago