fmicompbio / eisaRLinks
Exon-Intron Split Analysis (EISA) in R
☆17Updated 2 weeks ago
Alternatives and similar repositories for eisaR
Users that are interested in eisaR are comparing it to the libraries listed below
Sorting:
- Bead-based single-cell atac processing☆33Updated 4 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆30Updated last year
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- binned motif enrichment analysis and visualisation☆43Updated 2 weeks ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- scover☆24Updated 2 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 7 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- ☆41Updated 3 years ago
- ☆28Updated 6 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Model-based tumour subclonal deconvolution using population genetics☆33Updated last week
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- Pairwise Hierarchical Model☆20Updated 3 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- A toolkit for working with ATAC-seq data.☆24Updated last year
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- Identify and correct invalid gene symbols☆60Updated last year
- An R package to analyze single-cell V(D)J data☆28Updated 2 years ago
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago