Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
☆28May 31, 2023Updated 2 years ago
Alternatives and similar repositories for csf_aging
Users that are interested in csf_aging are comparing it to the libraries listed below
Sorting:
- Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.☆12May 3, 2023Updated 2 years ago
- ☆33Feb 26, 2025Updated last year
- Code used to analyze datasets and generate figures from Williams et al., 2021☆16Jun 29, 2021Updated 4 years ago
- ☆95Aug 20, 2019Updated 6 years ago
- Data visualization tools for brain tumour datasets☆15Sep 13, 2021Updated 4 years ago
- Machine learning-based identification of tumor-infiltrating immune cell-associated lncRNAs for improving outcomes and immunotherapy respo…☆14Sep 7, 2022Updated 3 years ago
- An R package for multi-dimensional pathway enrichment analysis☆17Jan 8, 2026Updated last month
- ☆16May 10, 2023Updated 2 years ago
- scAB detects multiresolution cell states with clinical significance☆20Nov 14, 2022Updated 3 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆15Jun 15, 2020Updated 5 years ago
- 10x Genomics analysis guides files☆29Jan 21, 2026Updated last month
- Computational pipeline to process EasySci-RNA data.☆23Jan 17, 2024Updated 2 years ago
- This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package☆45Apr 13, 2024Updated last year
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆81Oct 29, 2024Updated last year
- Multi-Omics integration and VIsualization in Cancer Subtyping☆146Jul 19, 2021Updated 4 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Oct 12, 2022Updated 3 years ago
- CDSeq R Package☆21Jul 1, 2025Updated 8 months ago
- Visualize the results of cell-cell communication analysis☆25Jan 21, 2023Updated 3 years ago
- GSCALite: Gene set for cancer analysis☆23May 25, 2022Updated 3 years ago
- ☆23May 28, 2019Updated 6 years ago
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆26Nov 18, 2023Updated 2 years ago
- RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.☆24Updated this week
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆128May 30, 2025Updated 9 months ago
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆11Mar 2, 2023Updated 3 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Nov 10, 2021Updated 4 years ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Jan 3, 2020Updated 6 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Oct 25, 2024Updated last year
- Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.☆27Nov 2, 2021Updated 4 years ago
- collected resource for scRNA-seq analysis☆67Jul 19, 2023Updated 2 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆29Aug 16, 2021Updated 4 years ago
- my learning journey☆75May 23, 2024Updated last year
- 📦R包：Make TCGA download and prepare easy!☆153Sep 19, 2025Updated 5 months ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- ☆31Aug 4, 2023Updated 2 years ago
- The integration of single cell rank-based gene set enrichment analysis☆147Jan 14, 2026Updated last month
- My configuration files on macOS☆11Jan 27, 2026Updated last month
- ☆32Dec 2, 2021Updated 4 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆34Feb 24, 2026Updated last week