MaayanLab / archs4pyLinks
Python package to load and query ARCHS4 data
☆23Updated last month
Alternatives and similar repositories for archs4py
Users that are interested in archs4py are comparing it to the libraries listed below
Sorting:
- Functional Embedding of Gene Signatures☆46Updated last year
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 2 years ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- ☆27Updated 5 months ago
- Connectivity Map analysis in MATLAB☆46Updated 3 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆25Updated 6 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆51Updated 4 months ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- flexible CDR based distance metrics☆66Updated last year
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Updated 2 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- Prize-Collecting Steiner Forests for Interactomes☆61Updated last year
- Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info☆57Updated 3 weeks ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆17Updated 11 months ago
- ☆26Updated 3 months ago
- ☆29Updated 2 months ago
- bioinformatics plotting and tools☆59Updated last year
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offer…☆54Updated last year
- ☆37Updated 3 months ago
- DRUGZ software☆23Updated 4 years ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆29Updated 5 months ago
- ☆38Updated last year
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆68Updated 2 weeks ago
- CLUMPS adapted to post-translational modifications.☆10Updated 3 months ago