wuaipinglab / ImmuCC
Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
☆25Updated 3 years ago
Alternatives and similar repositories for ImmuCC:
Users that are interested in ImmuCC are comparing it to the libraries listed below
- ☆47Updated 4 months ago
- Multiscale embedded gene co-expression network analysis☆51Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- Scripts for processing single liver cells RNA-Seq 10X Genomics Data☆24Updated 6 years ago
- ☆29Updated 6 years ago
- ☆30Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- A pipeline for scRNA-seq data analysis☆14Updated last month
- scWGCNA☆60Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 11 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- ☆63Updated 10 months ago
- Bayesian network plot for the enrichment analysis results☆64Updated 7 months ago
- ☆47Updated 5 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated 2 years ago
- ☆40Updated 7 years ago
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆45Updated last year
- ☆55Updated 4 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆50Updated 2 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆51Updated 7 years ago
- R-code used for single-cell RNA-Seq analysis of kidney data.☆17Updated 5 years ago
- scRNA-seq cell type identification☆44Updated 5 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆56Updated 6 months ago
- Analysis notebooks and data for AML hierarchies paper☆16Updated last year
- Processed rna-seq data, copy number variation data, and methylation data on GEO and TCGA☆25Updated 2 years ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆47Updated 9 months ago