wuaipinglab / ImmuCC
Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
☆25Updated 3 years ago
Alternatives and similar repositories for ImmuCC:
Users that are interested in ImmuCC are comparing it to the libraries listed below
- ☆28Updated 6 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- ☆47Updated 3 months ago
- scWGCNA☆59Updated 2 years ago
- Multiscale embedded gene co-expression network analysis☆51Updated last year
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- R-code used for single-cell RNA-Seq analysis of kidney data.☆17Updated 5 years ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- ☆30Updated 3 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆44Updated last year
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated 2 years ago
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆27Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆55Updated 5 months ago
- ☆40Updated 7 years ago
- Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie…☆25Updated 2 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆49Updated 2 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆46Updated 4 months ago
- Bayesian network plot for the enrichment analysis results☆64Updated 6 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆21Updated 2 years ago
- Pseudotime Analysis for Bulk Data☆15Updated 8 months ago
- A pipeline for scRNA-seq data analysis☆13Updated 3 weeks ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 2 years ago
- ☆62Updated 9 months ago
- Genetic Heterogeneity Profiling by Single Cell RNA Sequencing☆35Updated 4 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago