Cell type purification by single-cell transcriptome-trained sorting
☆16Jul 8, 2019Updated 7 years ago
Alternatives and similar repositories for GateID
Users that are interested in GateID are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools which deal with multiple single cell measurements☆25May 28, 2026Updated last month
- ☆16Jul 9, 2024Updated 2 years ago
- Scripts for processing sci-RNA-seq/sci-ATAC-seq/sci-CAR reads processing☆15Dec 12, 2018Updated 7 years ago
- R package for performing Mendelian Randomization using mixture models☆25Jan 27, 2020Updated 6 years ago
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Guided construction of single cell reference☆16Jul 3, 2023Updated 3 years ago
- GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index☆36Jun 18, 2018Updated 8 years ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Mar 26, 2026Updated 3 months ago
- Marker gene selection from scRNA-seq data☆16Sep 15, 2020Updated 5 years ago
- SAveRUNNER (Searching off-lAbel dRUg aNd NEtwoRk) - a network-based approach for drug repurposing☆14Nov 27, 2024Updated last year
- ☆22Oct 30, 2022Updated 3 years ago
- Implements several Markov chain Monte Carlo (MCMC) algorithms for the latent Dirichlet allocation (LDA) model☆11Feb 11, 2020Updated 6 years ago
- ☆28Apr 18, 2018Updated 8 years ago
- Single-cell Orientation Tracing☆22Jan 23, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Python library for the design and control of artificial swarms.☆13Sep 10, 2017Updated 8 years ago
- Lightweight pipeline for processing droplet-based single-cell RNA-seq data☆18Nov 4, 2020Updated 5 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 6 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and S…☆44Jun 16, 2026Updated last month
- ☆46Aug 13, 2024Updated last year
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆44Mar 3, 2017Updated 9 years ago
- Immunogenetic Data Tools related to HLA, GLStrings, Linkage Disequilibrium☆11Jun 14, 2023Updated 3 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Jul 12, 2023Updated 3 years ago
- ☆64Jul 6, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆48May 13, 2016Updated 10 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Jul 1, 2020Updated 6 years ago
- See: https://www.iscb.org/ismb2018/3511#am1☆18Sep 10, 2018Updated 7 years ago
- TRAPPIST: Totally Rad Analysis Pipelines Python Informatics Super Tool (actually, a python-based genomics analysis toolbox)☆14Jan 25, 2018Updated 8 years ago
- Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human H…☆15Mar 10, 2023Updated 3 years ago
- Bayesian Logistic Regression with Hyper-LASSO priors☆10Dec 14, 2025Updated 7 months ago
- ☆20Oct 22, 2020Updated 5 years ago
- scNMT-seq gastrulation☆42Feb 8, 2023Updated 3 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Dec 22, 2022Updated 3 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- BERMUDA (Batch Effect ReMoval Using Deep Autoencoders) is a novel transfer-learning-based method for batch correction in scRNA-seq data.☆30Dec 29, 2019Updated 6 years ago
- An R package for non-negative and sparse CCA☆14May 1, 2023Updated 3 years ago
- UniCell Deconvolve Paper☆10Apr 25, 2023Updated 3 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Nov 16, 2021Updated 4 years ago