chlbaron / GateID
Cell type purification by single-cell transcriptome-trained sorting
☆14Updated 5 years ago
Alternatives and similar repositories for GateID:
Users that are interested in GateID are comparing it to the libraries listed below
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Updated 2 years ago
- ☆12Updated 5 years ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆17Updated 3 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- ☆12Updated 8 months ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- ☆28Updated 6 years ago
- ☆12Updated 10 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- ☆29Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆46Updated 8 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆14Updated 5 years ago
- Reconstruction of spatial context of gene expression with optimal transport☆11Updated 6 years ago
- An R package to analyze single-cell V(D)J data☆24Updated last year
- a tool for summarizing and integrating gene-set analysis results☆16Updated 7 months ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆43Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- SCASA: Single cell transcript quantification tool☆20Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Landscape Single Cell Entropy☆19Updated 4 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆31Updated last year
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 2 years ago
- ☆18Updated last year
- ☆39Updated 4 years ago
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago