jokergoo / cola
A General Framework for Consensus Partitioning
☆61Updated last month
Alternatives and similar repositories for cola:
Users that are interested in cola are comparing it to the libraries listed below
- Identify and correct invalid gene symbols☆59Updated 4 months ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated this week
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 9 months ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- Statistical power studies for multi-omics experiments.☆30Updated 2 months ago
- Explore the cancer relevance of your gene list☆50Updated 3 weeks ago
- Toolbox with R scripts☆38Updated 6 years ago
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆47Updated 4 months ago
- R package for Flexible dot plots☆29Updated 2 years ago
- Toolkit for Single-Cell Velocity☆55Updated 2 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆44Updated last year
- An r package that works as a wrapper to homologene☆43Updated last year
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 3 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- R/Bioconductor package for working with 10x scATACseq data☆39Updated last year
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆49Updated 4 months ago
- Course Materials for Genomics Data Mining☆22Updated last month
- ☆28Updated 6 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 5 months ago
- Gene-level general linear mixed model☆20Updated 2 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated 2 years ago
- ☆40Updated 6 years ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 3 months ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- 🧬 Gene analysis toolkit based on R☆56Updated 2 months ago
- ☆20Updated 2 years ago