sigven / oncoEnrichRLinks
Explore the cancer relevance of your gene list
☆52Updated 2 weeks ago
Alternatives and similar repositories for oncoEnrichR
Users that are interested in oncoEnrichR are comparing it to the libraries listed below
Sorting:
- Model-based tumour subclonal deconvolution using population genetics☆33Updated last month
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆19Updated last week
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Updated 5 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated last year
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Accessing AlphaMissense Data Resources in R☆13Updated last month
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 6 years ago
- SCASA: Single cell transcript quantification tool☆22Updated 2 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- scover☆24Updated 2 years ago
- ☆29Updated 2 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 11 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 3 years ago
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Code accompanying The Evolutionary history of 2,658 cancers☆46Updated 4 years ago
- Explore and download data from the recount3 project☆37Updated 3 months ago