sigven / oncoEnrichRLinks
Explore the cancer relevance of your gene list
☆52Updated last month
Alternatives and similar repositories for oncoEnrichR
Users that are interested in oncoEnrichR are comparing it to the libraries listed below
Sorting:
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 2 weeks ago
- Model-based tumour subclonal deconvolution using population genetics☆33Updated last month
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Updated 4 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Code accompanying The Evolutionary history of 2,658 cancers☆46Updated 4 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆19Updated 3 weeks ago
- Trans-association between HLA and TCR-CDR3☆19Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆78Updated last month
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- ☆29Updated 2 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 months ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Snakemake pipeline for running MAJIQ☆23Updated 2 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆30Updated 6 years ago
- Comprehensive Human Expressed SequenceS☆19Updated 6 months ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆17Updated last week
- SCASA: Single cell transcript quantification tool☆22Updated 2 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 2 weeks ago
- Explore and download data from the recount3 project☆37Updated 4 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Updated 4 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago