ShixiangWang / self-studyLinks
My Self-Study Room: keep tidy and lightweight
☆31Updated last year
Alternatives and similar repositories for self-study
Users that are interested in self-study are comparing it to the libraries listed below
Sorting:
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- ☆20Updated 4 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- ☆40Updated 7 years ago
- ☆20Updated 2 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated this week
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- ☆17Updated 2 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 3 years ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆19Updated 5 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆15Updated 2 years ago
- Main repository for Drews et al. (Nature, 2022)☆41Updated last year
- The source code of web server TIP, including example data.☆19Updated 6 years ago
- ☆29Updated 6 years ago
- ☆25Updated last year
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- ☆17Updated 5 years ago
- ☆13Updated 7 years ago
- ☆47Updated 5 months ago
- Pseudotime Analysis for Bulk Data☆15Updated 10 months ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆12Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 2 months ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Updated 5 years ago
- ☆55Updated last year
- ☆13Updated 3 months ago
- Repository for codes for the HBCA paper☆36Updated 2 years ago
- R package of CSOmap(developing☆14Updated 3 years ago