ShixiangWang / self-study
My Self-Study Room: keep tidy and lightweight
☆30Updated 9 months ago
Alternatives and similar repositories for self-study:
Users that are interested in self-study are comparing it to the libraries listed below
- ☆11Updated 6 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆29Updated 7 months ago
- Calculating Tumor microenvironment score☆28Updated 2 years ago
- The source code of web server TIP, including example data.☆18Updated 5 years ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆17Updated 3 weeks ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Updated 3 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 3 years ago
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- ☆16Updated 4 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 3 years ago
- ☆17Updated 5 years ago
- ☆20Updated 2 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Updated 5 years ago
- ☆14Updated 2 years ago
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆15Updated last year
- ☆20Updated 4 years ago
- ☆13Updated 7 years ago
- ☆29Updated 6 years ago
- ☆12Updated 3 years ago
- R package of CSOmap(developing☆14Updated 2 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆20Updated 2 years ago
- Analysis notebooks and data for AML hierarchies paper☆15Updated last year
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆41Updated last year
- ChIP-seq analysis notes from Tommy Tang☆19Updated 8 years ago
- ☆29Updated 3 years ago