Alternatives and similar repositories for HAMFA:

Users that are interested in HAMFA are comparing it to the libraries listed below

• BioinformaticsFMRP / PanCanStem_Web
  ☆29Updated 3 years ago
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆28Updated last year
• jmzeng1314 / IRseq
  ☆10Updated 7 years ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆42Updated last year
• MSZaki / Aging-and-CR-rat-atlas
  Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…
  ☆28Updated 5 years ago
• YutingPKU / SingleCell-Multiomics
  ☆64Updated 2 years ago
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆19Updated 5 years ago
• ShixiangWang / install_GISTIC
  Install GISTIC2 by one line code; GISTIC2 docker image
  ☆41Updated last year
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆36Updated last year
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆72Updated last year
• BostonGene / MFP
  Mollecular Functional Portraits
  ☆36Updated 10 months ago
• lessonskit / Single-cell-RNA-sequencing-of-human-kidney
  R-code used for single-cell RNA-Seq analysis of kidney data.
  ☆17Updated 5 years ago
• jmzeng1314 / GSE76275-TNBC
  ☆17Updated 4 years ago
• jmzeng1314 / myScRNA-seq
  ☆13Updated 7 years ago
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆63Updated last year
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆47Updated last year
• jmzeng1314 / mouse-xx-xy-C1
  ☆17Updated 5 years ago
• youqiongye / CRC_scRNAseq
  ☆44Updated 3 years ago
• PoisonAlien / TCGAmutations
  R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE
  ☆91Updated 4 months ago
• shengxin321 / HumanKidney_eQTL_and_snATAC-seq
  codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data
  ☆19Updated 4 years ago
• dgrun / RaceID3_StemID2
  Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…
  ☆15Updated 6 years ago
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆35Updated last year
• ggjlab / scHCL
  ☆48Updated 4 years ago
• GerkeLab / TCGAhrd
  Homologous recombination deficiency in TCGA PanCancer Atlas
  ☆25Updated 4 years ago
• xjsun1221 / RSEM_with_limma_edgeR_Deseq2
  ☆37Updated 4 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆28Updated 2 years ago
• Gibbsdavidl / Immune-Subtype-Clustering
  This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".
  ☆18Updated 5 years ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆34Updated 4 years ago
• kevlitchfield1 / CPI1000_paper
  ☆20Updated 4 years ago
• HuangLabUMN / oncoPredict
  An R package for drug response prediction and drug-gene association prediction.
  ☆18Updated 10 months ago