visualization tools for exon/junction coverage
☆12Dec 30, 2019Updated 6 years ago
Alternatives and similar repositories for spliceclust
Users that are interested in spliceclust are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- indel haplotype visualization on the command line from BAM files☆12Mar 12, 2014Updated 12 years ago
- A dotplot application for DNA/RNA sequence☆12Nov 28, 2022Updated 3 years ago
- Multiple sequence alignment browser☆12Dec 12, 2022Updated 3 years ago
- ☆13Sep 11, 2025Updated last year
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆16Aug 1, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fully indexable dictionaries - access/rank/select operations☆13Sep 10, 2018Updated 8 years ago
- A tidy interface for coverage analysis☆33Feb 18, 2020Updated 6 years ago
- Evolutionary frequency visualization tool of temporal data☆24Jan 25, 2022Updated 4 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆15May 16, 2026Updated 5 months ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated last year
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆25Jul 11, 2021Updated 5 years ago
- FM-index for full-text search☆20Nov 20, 2021Updated 4 years ago
- Native Julia suffix array implementation; Derived from sais☆19Apr 20, 2026Updated 6 months ago
- RAPTR-SV uses Read Pair and Split Read methods to identify structural variants in paired-end WGS data☆10Aug 18, 2016Updated 10 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Convert sequence IDs between ucsc/refseq/genbank☆16Aug 28, 2018Updated 8 years ago
- ☆17Nov 3, 2023Updated 2 years ago
- A varitation graph tool☆10Dec 23, 2019Updated 6 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 27, 2026Updated 7 months ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 4 years ago
- ☆13Dec 19, 2018Updated 7 years ago
- Structural Variant Prediction Viewer☆36Jul 19, 2017Updated 9 years ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆20Oct 29, 2019Updated 7 years ago
- ☆10Oct 21, 2019Updated 7 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 7 years ago
- MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data.☆59Jul 2, 2026Updated 4 months ago
- Presentation at the Single Cell Nanocourse in Spring 2017 at Harvard Medical School☆10Mar 7, 2017Updated 9 years ago
- Log4mql is a mql4 (MetaQuotes MetaTrader 4 Language) library for flexible logging to files and the terminal console. It is modeled after …☆13Aug 19, 2019Updated 7 years ago
- Notes on DNA methylation analysis☆12Aug 11, 2026Updated 2 months ago
- Indel-aware consensus for aligned BAM☆22Aug 16, 2025Updated last year
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆62Dec 27, 2022Updated 3 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆15Aug 24, 2026Updated 2 months ago
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Biological Data Science Workshops☆10Apr 22, 2022Updated 4 years ago
- Interface to Popular Multiple Sequence Alignment Tools - R-package☆12Sep 6, 2024Updated 2 years ago
- CViTjs - Chromosome Viewing Tool. A javascript tool for quick whole-genome views of data.☆12Jan 15, 2021Updated 5 years ago
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- A read alignment visualization library for long reads☆10Aug 6, 2022Updated 4 years ago
- Organ Bath Pharmacology Simulation☆11Dec 16, 2024Updated last year
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago