Demonstration of the use of an R package to organize a data analysis project
☆23Mar 30, 2020Updated 6 years ago
Alternatives and similar repositories for ProjectAsPackage
Users that are interested in ProjectAsPackage are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Snakefile to parallelize bwa.☆13Oct 25, 2013Updated 12 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Apr 25, 2019Updated 7 years ago
- ☆42Apr 15, 2021Updated 5 years ago
- ☆10Jan 8, 2018Updated 8 years ago
- Helper script for bioconductor/bioconductor_docker☆13May 19, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Provides classes for working with sets☆11Dec 19, 2025Updated 7 months ago
- CREAM (Clustering of Functional Regions Analysis Method) is a new method for identification of clusters of functional regions (COREs) wi…☆14Feb 11, 2021Updated 5 years ago
- Website and slides for intro to bioinformatics class at Fred Hutch☆13Jun 4, 2018Updated 8 years ago
- Template for building a bioconductor workshop package using github actions☆23Updated this week
- Repo for course Tools for complex data analysis☆11Jul 15, 2024Updated 2 years ago
- ☆12Jul 2, 2026Updated last month
- Single-cell Hi-C data analysis toolbox☆28Aug 13, 2021Updated 4 years ago
- recipe for all dependencies of R on Ubuntu☆35Aug 9, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ATAC_seq Workshop☆13Feb 16, 2018Updated 8 years ago
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Oct 31, 2025Updated 9 months ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15May 12, 2025Updated last year
- A graph visualisation tool targeted at persistent homology applications.☆12Jul 28, 2020Updated 6 years ago
- Somatic workflow for Kids-First☆14Jul 21, 2026Updated 2 weeks ago
- Source files for online resources of Bioinformatics of Infectious Diseases course☆22May 21, 2020Updated 6 years ago
- Material for the Explainable Machine Learning Workshop☆18Nov 1, 2019Updated 6 years ago
- ☆13Apr 16, 2026Updated 3 months ago
- Read HOMER motif analysis output in R.☆17Mar 1, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An R interface to write OpenCL functions☆11Mar 15, 2022Updated 4 years ago
- A General Framework for Consensus Partitioning☆65Jan 30, 2026Updated 6 months ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆13Dec 26, 2022Updated 3 years ago
- Client to access ExperimentHub resources☆11Jun 15, 2026Updated last month
- WICA: nonlinear weighted ICA☆12Oct 3, 2023Updated 2 years ago
- The command-line interface to GGD☆42Oct 16, 2022Updated 3 years ago
- Materials for the 2020 MSc Data Skills in Reproducible Science course at the University of Glasgow School of Psychology☆16Aug 22, 2021Updated 4 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆12Apr 13, 2026Updated 3 months ago
- Brings SummarizedExperiment to the tidyverse☆30Mar 17, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Build and maintain multiple custom conda environments all in one place.☆40Dec 3, 2024Updated last year
- RUVprps enables accurate and scalable RNA-seq normalization without prior knowledge of biological and unwanted variation☆14Jun 11, 2026Updated last month
- Ricci flow experiments on discrete surfaces☆15Sep 30, 2014Updated 11 years ago
- R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions☆13Jun 25, 2024Updated 2 years ago
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- Pipeline for testing shifts in poly(A) tail lengths estimated by nanopolish☆10May 5, 2020Updated 6 years ago
- An R package containing addins that are useful for Mine's workflow.☆26Nov 17, 2020Updated 5 years ago