jeetsukumaran / delineate
Package for species delimitation analysis
☆10Updated last month
Alternatives and similar repositories for delineate:
Users that are interested in delineate are comparing it to the libraries listed below
- Calculate Hybrid Index and Heterozygosity from SNP data☆10Updated 2 months ago
- An R function to compute Concordance Factors from SNP datasets☆13Updated 2 months ago
- ☆17Updated 5 months ago
- This repository contains the code and manual for the R package delimitR.☆17Updated 2 years ago
- Visualizing gene tree conflict using Phyparts, and ETE3☆14Updated last year
- ☆38Updated last year
- Workflow to detect and phase hybrids in target capture data☆18Updated last year
- R package for analysis of hybrids and hybrid zones☆19Updated last year
- K-mer based classifier for Y-contig identification from Whole Genome Assemblies☆11Updated 4 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- ☆21Updated 10 years ago
- Quartet Sampling method for phylogenetic branch support evaluation☆16Updated 11 months ago
- ☆17Updated 4 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- ☆18Updated 7 years ago
- Alignment-Based Sequence extraction☆15Updated 3 years ago
- ASTRAL for PaRalogs and Orthologs☆21Updated 2 years ago
- Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clin…☆15Updated 4 months ago
- An R Package to build and simulate coalescent models☆19Updated 9 months ago
- mtGrasp: de novo reference-grade mitochondrial genome assembly and standardization☆15Updated this week
- Population assignment analysis using R☆17Updated 3 months ago
- Sex assignment through coverage☆17Updated 11 months ago
- UCE Bioinformatics Pipeline☆15Updated 2 months ago
- ☆26Updated 3 years ago
- Code for computing various support scores for internodes☆19Updated 4 years ago
- ☆13Updated 7 years ago
- Simple scripts for concatenate alignments and rename terminals for phylogenetics☆21Updated 2 years ago
- Phylogenetic penalized likelihood☆47Updated 6 months ago
- A genome-wide IM blockwise likelihood estimation toolkit☆15Updated 7 months ago
- ☆10Updated 11 months ago