jeetsukumaran / delineateLinks
Package for species delimitation analysis
☆10Updated 5 months ago
Alternatives and similar repositories for delineate
Users that are interested in delineate are comparing it to the libraries listed below
Sorting:
- An R function to compute Concordance Factors from SNP datasets☆14Updated 6 months ago
- Calculate Hybrid Index and Heterozygosity from SNP data☆10Updated last month
- This repository contains the code and manual for the R package delimitR.☆17Updated 3 years ago
- ☆18Updated 8 months ago
- R package for analysis of hybrids and hybrid zones☆21Updated last year
- mtGrasp: de novo reference-grade mitochondrial genome assembly and standardization☆17Updated 3 months ago
- ☆39Updated last year
- Workflow to detect and phase hybrids in target capture data☆19Updated 2 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- ☆18Updated 4 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- Code for computing various support scores for internodes☆19Updated 5 years ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆13Updated last year
- Quartet Sampling method for phylogenetic branch support evaluation☆18Updated last year
- A package for population structure inference from RAD-seq data☆31Updated 4 years ago
- Visualizing gene tree conflict using Phyparts, and ETE3☆14Updated last year
- Alignment-Based Sequence extraction☆15Updated 3 years ago
- Phylogenetic penalized likelihood☆48Updated 2 weeks ago
- Population assignment analysis using R☆17Updated 2 months ago
- ☆22Updated 11 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- K-mer based classifier for Y-contig identification from Whole Genome Assemblies☆11Updated 5 years ago
- ☆14Updated last year
- Scripts for population genetics analysis☆20Updated 2 years ago
- UCE Bioinformatics Pipeline☆16Updated 6 months ago
- ☆18Updated 7 years ago
- An R Package to build and simulate coalescent models☆20Updated last year
- Helper scripts for processing and visualization of phylogenetics datasets☆29Updated last year
- Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clin…☆16Updated 7 months ago
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆15Updated 3 months ago