Package for species delimitation analysis
☆11Jan 7, 2025Updated last year
Alternatives and similar repositories for delineate
Users that are interested in delineate are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository contains the code and manual for the R package delimitR.☆17Apr 19, 2022Updated 3 years ago
- An R function to compute Concordance Factors from SNP datasets☆15Dec 4, 2025Updated 3 months ago
- Phylogenetic Network Inference without ILS☆19Jul 31, 2022Updated 3 years ago
- A tool to root phylogenies☆23Sep 5, 2024Updated last year
- Bayesian estimation of the evolutionary rate matrix.☆10Dec 8, 2025Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- An R Package to build and simulate coalescent models☆20Updated this week
- spruceup☆25Aug 15, 2025Updated 7 months ago
- Calculate distances between phylogenetic trees in R☆35Updated this week
- Machuruku☆32Jan 20, 2025Updated last year
- A Julia package for estimating phylogenetic networks from genomic data☆20Jun 3, 2024Updated last year
- Calculate Hybrid Index and Heterozygosity from SNP data☆16Sep 2, 2025Updated 6 months ago
- An implementation of the prediction strength algorithm from Tibshirani, Walther, Botstein, and Brown's "Cluster validation by prediction …☆18Feb 17, 2011Updated 15 years ago
- Bayesian species delimitation integrating genes and traits☆12Aug 17, 2021Updated 4 years ago
- Implementation of "Multimodal Generative Models for Scalable Weakly-Supervised Learning" paper☆18Feb 9, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A pipeline for de novo assembly of population-level sequence capture datasets.☆12Nov 6, 2018Updated 7 years ago
- The source code for "Multimodal Variational Autoencoders for Semi-Supervised Learning: In Defense of Product-of-Experts"☆15Nov 24, 2020Updated 5 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Jul 2, 2020Updated 5 years ago
- Community board for Symbiota-related discussions☆28Oct 14, 2025Updated 5 months ago
- PTP model for species delimitation☆20May 5, 2019Updated 6 years ago
- method for modeling continuous and discrete population genetic structure☆38Jan 8, 2024Updated 2 years ago
- ☆23Mar 17, 2026Updated last week
- phyloGAN is a Generative Adversarial Network (GAN) that infers phylognetic relationships.☆11Jul 8, 2024Updated last year
- R package for analysis of hybrids and hybrid zones☆21Dec 30, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- PartitionFinder discovers optimal partitioning schemes for DNA sequences.☆71Mar 10, 2021Updated 5 years ago
- ☆21Mar 19, 2025Updated last year
- A reliable gap filling pipeline for draft genomes☆11Sep 17, 2019Updated 6 years ago
- ☆12Mar 8, 2024Updated 2 years ago
- ☆12Jan 29, 2025Updated last year
- Simulation package for getting gene tree distributions and loci / SNPs from input tree topologies and migration / Ne scenarios. Wraps aro…☆14Apr 20, 2024Updated last year
- ☆12Mar 11, 2025Updated last year
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Sep 6, 2023Updated 2 years ago
- R package to reconstruct ancestral networks inferred with RevBayes☆13Mar 15, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆112Mar 20, 2026Updated last week
- Python script for creating and analyzing simulated bpp datasets published in Flouris et al. 2019.☆10May 12, 2019Updated 6 years ago
- Using Digitized Collections-Based Data in Research: Applications for Ecology, Phylogenetics, and Biogeography Botany 2025.☆14Aug 7, 2025Updated 7 months ago
- UCE Bioinformatics Pipeline☆17Sep 29, 2025Updated 6 months ago
- coevol -- Correlated evolution of substitution rates and quantitative traits☆13Oct 18, 2024Updated last year
- A birth-death-hybridization based phylogenetic network simulator.☆11Oct 2, 2024Updated last year
- Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.☆13May 13, 2022Updated 3 years ago