mPTP - a tool for single-locus species delimitation
☆29Mar 14, 2026Updated 7 months ago
Alternatives and similar repositories for mptp
Users that are interested in mptp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Sep 30, 2026Updated 2 weeks ago
- Machuruku☆32Jan 20, 2025Updated last year
- PTP model for species delimitation☆20May 5, 2019Updated 7 years ago
- ☆11Dec 12, 2024Updated last year
- Bayesian species delimitation integrating genes and traits☆11Aug 17, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Visualize and perform a multitude of operations on newick files☆17Mar 7, 2022Updated 4 years ago
- An R Package to build and simulate coalescent models☆21Sep 27, 2026Updated 3 weeks ago
- MP-EST estimates species trees from a set of gene trees by maximizing a pseudo-likelihood function☆13Oct 31, 2025Updated 11 months ago
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆15May 29, 2024Updated 2 years ago
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- CROP: Clustering 16s rRNA for OTU Prediction☆13May 2, 2017Updated 9 years ago
- Detection of evolutionary shifts in Ornstein-Uhlenbeck models☆19Aug 5, 2022Updated 4 years ago
- Scripts for file processing and analysis in phylogenetics and phylogeography☆14Jan 6, 2021Updated 5 years ago
- A collection of R code for dealing with SNP data and analyses☆24May 16, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Open Software for Teaching Evolutionary Biology at Multiple Scales Through Virtual Inquiries☆13Apr 1, 2026Updated 6 months ago
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆115Oct 3, 2026Updated 2 weeks ago
- GPU-accelerated DNA barcode classification☆14Jan 2, 2025Updated last year
- This repository contains workshop materials on Reproducible Scientific Practices for Conservation Biologists/Ecologists☆50Feb 20, 2026Updated 7 months ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆45Mar 4, 2024Updated 2 years ago
- R package: Evolutionary biology in R☆22Sep 4, 2026Updated last month
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 5 years ago
- Package for species delimitation analysis☆11Jan 7, 2025Updated last year
- R Interfaces to Phylogenetic Software☆12Jun 25, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- phylobayes mpi☆28Jul 30, 2026Updated 2 months ago
- ☆24Mar 15, 2026Updated 7 months ago
- Semi-Automatic Taxonomy Improvement and Validation Algorithm☆21Jan 8, 2024Updated 2 years ago
- PhyloNetworks: a julia package with utilities for phylogenetic networks☆175Oct 1, 2026Updated 2 weeks ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆14Oct 21, 2021Updated 4 years ago
- A library for working with phylogenetic and population genetic data.☆67Jul 18, 2026Updated 2 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆31Jan 19, 2019Updated 7 years ago
- ☆16Mar 20, 2023Updated 3 years ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆480Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Sep 6, 2026Updated last month
- ☆15Jun 6, 2023Updated 3 years ago
- Simulating Sequence Evolution☆10Jul 9, 2024Updated 2 years ago
- Biological sequence clustering tool with dynamic threshold☆26Oct 2, 2023Updated 3 years ago
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 5 years ago
- Scripts used in the annotation of B10K genomes☆16Jun 1, 2020Updated 6 years ago
- NGSphy: phylogenomic simulation of next-generation sequencing data☆14Mar 9, 2018Updated 8 years ago