Pas-Kapli / mptp
mPTP - a tool for single-locus species delimitation
☆24Updated last year
Related projects: ⓘ
- A tool to root phylogenies☆19Updated 2 weeks ago
- spruceup☆19Updated last month
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- ☆15Updated last week
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆32Updated last year
- ☆37Updated last year
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆19Updated 3 years ago
- Amplicon sequence processing workflow using QIIME 2 and Snakemake☆42Updated last week
- Visualizing gene tree conflict using Phyparts, and ETE3☆13Updated last year
- HybSeq Target Capture of 353 Protein Coding Genes in Any Angiosperm☆16Updated last year
- A fast approximation to a Dirichlet Process Mixture model (DPM) for clustering genetic data☆56Updated 2 years ago
- Code for computing various support scores for internodes☆18Updated 4 years ago
- Phylogenetic penalized likelihood☆45Updated last month
- AMPtk: Amplicon ToolKit for NGS data (formally UFITS)☆38Updated 10 months ago
- Interim data for the Darwin Tree of Life Project☆32Updated 4 years ago
- A Python phyloinformatic toolkit, and an implementation of tree-heterogeneous models of evolution☆28Updated last week
- A massively parallel tool for model selection and tree inference on thousands of genes☆41Updated 6 months ago
- ☆21Updated 10 years ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- Metagenomic Analysis in Real Time☆17Updated last month
- Automated de novo assembly of whole chloroplast genomes.☆43Updated 8 months ago
- Analyzer of Gene and Species Trees☆10Updated 8 years ago
- Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies☆17Updated last week
- ☆25Updated 3 years ago
- Alignment-Based Sequence extraction☆13Updated 2 years ago
- GATB Minia assembly pipeline☆29Updated last year
- Workflow to detect and phase hybrids in target capture data☆15Updated last year
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated last year
- Helper scripts for processing and visualization of phylogenetics datasets☆25Updated 7 months ago
- ☆16Updated 3 years ago