Alternatives and similar repositories for TreeDist:

Users that are interested in TreeDist are comparing it to the libraries listed below

• danlwarren / RWTY
  R We There Yet?
  ☆30Updated 2 years ago
• thednainus / Bayesian_tutorial
  Tutorial on Bayesian phylogenetic analysis
  ☆45Updated 7 years ago
• thibautjombart / treespace
  Explore spaces of phylogenetic trees
  ☆28Updated last year
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆44Updated this week
• evolbioinfo / pastml
  Ancestral character reconstruction and visualisation for rooted phylogenetic trees
  ☆32Updated 2 weeks ago
• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆24Updated 10 months ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆58Updated last month
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆24Updated 3 weeks ago
• alvinxhan / PhyCLIP
  Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
  ☆17Updated 4 years ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated 3 months ago
• duchene / phylomad
  ☆19Updated 7 months ago
• YuLab-SMU / treedataverse
  Meta package for processing and visualizing tree with data
  ☆27Updated 3 years ago
• merlebehr / treeSeg
  Implementation of the treeSeg algorithm as an R package.
  ☆14Updated 2 years ago
• crsl4 / phylogenetics-class
  A course in the theory and practice of phylogenetic inference from DNA sequence data
  ☆28Updated last week
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆54Updated 6 months ago
• 4ment / phylostan
  Phylogenetic inference using Stan
  ☆23Updated last year
• evolbioinfo / phylodeep
  PhyloDeep is a python library for parameter estimation and model selection from phylogenetic trees, based on deep learning.
  ☆23Updated 3 months ago
• mrborges23 / delta_statistic
  Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…
  ☆25Updated 3 years ago
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated 7 months ago
• emvolz-phylodynamics / treestructure
  ☆17Updated 8 months ago
• nvelden / geneviewer
  An R package designed for drawing gene arrow maps
  ☆41Updated last week
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• tothuhien / lsd-0.3beta
  ☆12Updated 5 years ago
• theosanderson / chronumental
  Estimating time trees from very large phylogenies
  ☆25Updated 6 months ago
• aaronmussig / PhyloDM
  Efficient calculation of phylogenetic distance matrices.
  ☆45Updated 3 months ago
• simonwhelan / prequal
  PREQUAL: a pre-alignment quality filter for comparative sequence analyses
  ☆31Updated 2 years ago
• statdivlab / paramedic
  Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations
  ☆14Updated 8 months ago
• ranwez / MACSE_V2_PIPELINES
  This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…
  ☆34Updated last year
• shaunpwilkinson / kmer
  K-mer Counting for Biological Sequence Analysis
  ☆26Updated 5 years ago