ms609 / TreeDistLinks
Calculate distances between phylogenetic trees in R
☆32Updated last week
Alternatives and similar repositories for TreeDist
Users that are interested in TreeDist are comparing it to the libraries listed below
Sorting:
- R We There Yet?☆31Updated 5 months ago
- Tutorial on Bayesian phylogenetic analysis☆47Updated 7 years ago
- Scalable relaxed clock phylogenetic dating☆25Updated 3 weeks ago
- Estimating time trees from very large phylogenies☆27Updated last year
- Metagenomics calibration R package☆20Updated 3 years ago
- Explore spaces of phylogenetic trees☆29Updated last year
- babette is an R package to work with BEAST2☆46Updated last week
- Phylogenetic ANalyses of DiversificAtion☆24Updated 7 months ago
- ☆12Updated 6 years ago
- ☆27Updated last year
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year
- Ancestral character reconstruction and visualisation for rooted phylogenetic trees☆35Updated 3 months ago
- PhyloDeep is a python library for parameter estimation and model selection from phylogenetic trees, based on deep learning.☆24Updated 10 months ago
- ☆19Updated last year
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆39Updated last month
- Implementation of the treeSeg algorithm as an R package.☆14Updated 3 years ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated last year
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Updated 7 years ago
- Welcome to the StrainHub Repo - Files and Data - StrainHub Online:☆17Updated 3 years ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 4 years ago
- Source files for online resources of Bioinformatics of Infectious Diseases course☆22Updated 5 years ago
- Fast alignment-free pangenome creation and exploration☆28Updated 5 years ago
- ☆17Updated 4 months ago
- Meta package for processing and visualizing tree with data☆28Updated 3 years ago
- ALDEx_bioc is the working directory for updating bioconductor☆28Updated 3 months ago
- Python version of PHLAWD☆21Updated 10 months ago
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆57Updated last year
- Analysis of Phylogenetics and Evolution☆71Updated 2 months ago
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Updated 11 years ago
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year