ms609 / TreeDistLinks
Calculate distances between phylogenetic trees in R
☆32Updated last week
Alternatives and similar repositories for TreeDist
Users that are interested in TreeDist are comparing it to the libraries listed below
Sorting:
- Explore spaces of phylogenetic trees☆29Updated last year
- Scalable relaxed clock phylogenetic dating☆25Updated last year
- R We There Yet?☆31Updated 3 months ago
- ☆27Updated last year
- Tutorial on Bayesian phylogenetic analysis☆46Updated 7 years ago
- Metagenomics calibration R package☆20Updated 3 years ago
- babette is an R package to work with BEAST2☆46Updated last month
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆39Updated last week
- Phylogenetic ANalyses of DiversificAtion☆24Updated 6 months ago
- Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations☆14Updated last year
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 4 years ago
- Estimating time trees from very large phylogenies☆26Updated 11 months ago
- An R-wrapper for lsd2☆9Updated 2 years ago
- ☆12Updated 6 years ago
- R package for microbial pangenomics☆24Updated 3 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 2 years ago
- Meta package for processing and visualizing tree with data☆28Updated 3 years ago
- ☆19Updated last year
- Simple R utilities for working with HMMER☆20Updated 9 months ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year
- Python version of PHLAWD☆21Updated 8 months ago
- An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)☆19Updated last week
- ALDEx_bioc is the working directory for updating bioconductor☆28Updated 2 months ago
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆56Updated 11 months ago
- diversity estimation under ecological networks☆84Updated 3 months ago
- Ancestral character reconstruction and visualisation for rooted phylogenetic trees☆34Updated last month
- ☆16Updated 3 months ago
- Reconstruction of transmission trees using genomic data☆63Updated last year
- Tools for analyzing trees☆14Updated 3 months ago
- Analysis of Phylogenetics and Evolution☆69Updated last month