Alternatives and similar repositories for delimitR

Users that are interested in delimitR are comparing it to the libraries listed below

• melisaolave / SNPs2CF
  An R function to compute Concordance Factors from SNP datasets
  ☆14Updated 7 months ago
• ribailey / gghybrid
  R package for analysis of hybrids and hybrid zones
  ☆21Updated last year
• esayyari / DiscoVista
  ☆40Updated last year
• LarsNauheimer / HybPhaser
  Workflow to detect and phase hybrids in target capture data
  ☆19Updated 2 years ago
• mmatschiner / snapp_prep
  Prepare XML input files for divergence-time estimation with SNAPP
  ☆19Updated 2 years ago
• clairemerot / angsd_pipeline
  ☆26Updated 2 years ago
• FePhyFoFum / SortaDate
  ☆18Updated 4 years ago
• simonhmartin / twisst
  Topology weighting by iterative sampling of sub-trees
  ☆79Updated 6 months ago
• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆30Updated 2 months ago
• mgaynor1 / nQuack
  An R package for predicting ploidal level from sequence data using site-based heterozygosity 
  ☆16Updated 5 months ago
• BenjaminPeter / rangeexpansion
  ☆13Updated 8 years ago
• pblischak / HyDe
  Hybridization detection using phylogenetic invariants
  ☆47Updated 8 months ago
• omys-omics / triangulaR
  Calculate Hybrid Index and Heterozygosity from SNP data
  ☆11Updated 3 months ago
• LohseLab / gIMble
  A genome-wide IM blockwise likelihood estimation toolkit
  ☆16Updated last year
• Capblancq / RDA-landscape-genomics
  ☆31Updated 3 years ago
• rufimov / ParalogWizard
  ☆13Updated 3 months ago
• enormandeau / stacks_workflow
  RADseq workflow using STACKS
  ☆58Updated last month
• miriammiyagi / QuIBL
  Quantifying Introgression via Branch Lengths
  ☆53Updated 2 years ago
• AlexKnyshov / alibaseq
  Alignment-Based Sequence extraction
  ☆15Updated 3 years ago
• sjoleary / SNPFILT
  ☆19Updated 7 years ago
• esrud / GONE
  GONE: Scripts, programs and an example data set
  ☆48Updated last year
• gphocs-dev / G-PhoCS
  G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …
  ☆34Updated 4 years ago
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆35Updated last year
• jessicarick / msmc2_scripts
  MSMC2 Scripts
  ☆26Updated last year
• FePhyFoFum / quartetsampling
  Quartet Sampling method for phylogenetic branch support evaluation
  ☆18Updated last year
• popgenDK / SATC
  Sex assignment through coverage
  ☆18Updated last month
• jbpease / dfoil
  DFOIL: Introgression Testing for Five Taxa
  ☆33Updated 4 years ago
• MaoYafei / TREEasy
  A tool to infer species tree and phylogenetic network from multilocus data
  ☆32Updated 5 years ago
• shenglin-liu / vcf2sfs
  R functions for generating site frequency spectra (SFS) from a VCF file.
  ☆28Updated 5 years ago
• btmartin721 / raxml_ascbias
  Script for removing or counting invariant sites for the RAxML ascertainment bias corrections
  ☆15Updated 9 months ago