YuboZhangPKU / ERICALinks
☆22Updated 2 years ago
Alternatives and similar repositories for ERICA
Users that are interested in ERICA are comparing it to the libraries listed below
Sorting:
- Robust identification of orthologous Synteny with the Orthology Index☆35Updated last month
- ☆32Updated 8 months ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆39Updated last year
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 9 months ago
- ☆45Updated 3 years ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- ☆41Updated 2 years ago
- a Semi-automated pipeline for assembling T2T genome☆24Updated last month
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆35Updated 3 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 5 years ago
- ☆24Updated 3 weeks ago
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated last month
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 7 years ago
- Genome Annotation Pipeline☆42Updated last year
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- ☆19Updated 3 years ago
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Automated pipeline for running CoalHMM☆13Updated 2 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- Software package for estimating fine-scale recombination rate.☆16Updated 4 years ago
- SCORPiOs is a synteny-guided gene tree correction pipeline for clades that have undergone a whole-genome duplication event.☆22Updated last year
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- ☆16Updated last year
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Updated 4 years ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated 10 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated last year
- ☆23Updated 3 years ago