fengcong3 / HAPPELinks
A tool to visualize the haplotype pattern and various information in excel.
☆24Updated 11 months ago
Alternatives and similar repositories for HAPPE
Users that are interested in HAPPE are comparing it to the libraries listed below
Sorting:
- ☆11Updated 4 years ago
- scripts used for processing and analyzing data in the article.☆13Updated 6 years ago
- issues for semina "Data Visulization"☆13Updated last month
- ☆29Updated 2 years ago
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- ☆18Updated 3 years ago
- Codes for the lettuce resequencing project in 2020☆30Updated 4 years ago
- Scripts that used in our chicken T2T manuscript.☆22Updated 3 weeks ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Updated 5 months ago
- Working on cotton resequencing☆11Updated 5 years ago
- Killifish genomics scripts☆12Updated 4 years ago
- Scripts to convert between file formats for various analyses☆16Updated 9 months ago
- Scripts of population genomics analysis☆36Updated 7 years ago
- ☆23Updated 3 years ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 9 months ago
- A comprehensive pipeline for RNAseq data analysis☆22Updated last year
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- ☆17Updated 2 years ago
- Design gene specific KASP and CAPS/dCAPS primers for any species☆18Updated 3 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 3 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆29Updated 2 years ago
- crussmap is a faster tool to convert genome coordinates between difference reference assemblies.☆21Updated 2 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆53Updated 5 months ago
- ☆11Updated 3 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆32Updated last year
- ☆15Updated 11 months ago
- Customized codes used in Tibetan wheat sequencing project.☆13Updated 3 years ago
- The cattle Genotype-Tissue Expression atlas v1☆28Updated 2 years ago