standard-aaron / palm
Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies
☆16Updated 4 years ago
Alternatives and similar repositories for palm
Users that are interested in palm are comparing it to the libraries listed below
Sorting:
- A set of tools for modelling ancestry patterns along the genome.☆22Updated 3 months ago
- ☆20Updated 4 years ago
- Tools for inference of the DFE with dadi☆14Updated 4 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- ☆23Updated last year
- R code to compute the Singleton Density Score (SDS)☆30Updated 8 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- predicting DFE and alpha from polymorphism data☆28Updated 6 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆59Updated last week
- Pinpoints the mutation favored by selection☆34Updated 3 years ago
- Genealogical Estimation of Variant Age (GEVA)☆28Updated 3 years ago
- ARG-based inference of selection using deep learning☆18Updated last year
- Haplotype and population structure inference using neural networks.☆27Updated 5 months ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- ☆24Updated 7 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆51Updated 2 weeks ago
- Tools and Utilities for msmc and msmc2☆47Updated last year
- Graph-aware Retrieval of Selective Sweeps☆21Updated 8 months ago
- LDna: an R package to perform linkage disequilibrium network analysis