Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies
☆16Nov 13, 2020Updated 5 years ago
Alternatives and similar repositories for palm
Users that are interested in palm are comparing it to the libraries listed below
Sorting:
- [mu]tation [s]pectrum [h]istory [i]nference☆27Jan 9, 2025Updated last year
- Work for the tree sequence inference paper.☆23Oct 19, 2020Updated 5 years ago
- Process MS results in R, in a tidy way☆16May 25, 2018Updated 7 years ago
- Site frequency spectrum estimation based on window expectation-maximisation algorithm☆16May 19, 2023Updated 2 years ago
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Mar 10, 2026Updated last week
- ☆20Sep 10, 2020Updated 5 years ago
- ☆19May 5, 2021Updated 4 years ago
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 3 years ago
- Coalescent Likelihood Under Effects of Selection - Inferring selection & allele frequency trajectories from nucleotide data☆26Jul 8, 2022Updated 3 years ago
- Tools for identifying introgressed archaic sequence.☆12Jun 20, 2017Updated 8 years ago
- A chromosomal visualization package for python.☆15Nov 21, 2023Updated 2 years ago
- ☆15Oct 9, 2025Updated 5 months ago
- Lesson for the shell for genomics☆10Jan 12, 2021Updated 5 years ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Oct 5, 2020Updated 5 years ago
- Quantitative Allele Specific Analysis of Reads. Joint genotyping & ASE inference for RNA-seq data☆28Feb 4, 2017Updated 9 years ago
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 4 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- A library of standard population genetic models☆139Updated this week
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆88Jun 14, 2021Updated 4 years ago
- ☆46Mar 18, 2025Updated last year
- Leveraging functional information to improve GWAS summary statistic imputation☆20Aug 10, 2021Updated 4 years ago
- feature-based deep learning for the identification of selective sweeps☆59Feb 7, 2026Updated last month
- ☆16May 13, 2022Updated 3 years ago
- Scalable population structure inference☆18Oct 22, 2022Updated 3 years ago
- a short graduate population biology course☆13Feb 22, 2023Updated 3 years ago
- An R package to detect selection in biological pathways☆14Jan 19, 2024Updated 2 years ago
- Software for detecting introgression using supervised machine learning☆21Nov 21, 2022Updated 3 years ago
- Demographic analysis of Brassica oleracea☆10Jan 30, 2026Updated last month
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆67Apr 25, 2024Updated last year
- intro to programming for IE2 evolution students☆12Jan 31, 2024Updated 2 years ago
- ☆13Oct 2, 2019Updated 6 years ago
- Materials for the RC New User Seminar☆12Jan 14, 2026Updated 2 months ago
- Software for linkage disequilibrium graphical models☆16Apr 6, 2025Updated 11 months ago
- QTG_Finder, a QTL causal gene prioritization tool☆11Nov 9, 2024Updated last year
- discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes inc…☆49Feb 7, 2026Updated last month
- ☆28Dec 1, 2022Updated 3 years ago
- deep learning prediction of geographic location from individual genome sequences☆52Jan 20, 2025Updated last year
- Shiny apps for teaching Population Genetics☆67Feb 4, 2023Updated 3 years ago
- Manim code for my videos in 2020☆10May 6, 2020Updated 5 years ago