omerwe / polyfunLinks
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
☆116Updated 6 months ago
Alternatives and similar repositories for polyfun
Users that are interested in polyfun are comparing it to the libraries listed below
Sorting:
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Find causal cell-types underlying complex trait genetics☆86Updated 4 months ago
- A factor analysis package☆100Updated 13 years ago
- Cross-population polygenic prediction☆85Updated 7 months ago
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- Repo for the R package coloc☆168Updated 2 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated last month
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆115Updated 2 years ago
- ☆79Updated 3 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- methods for functional summary-based imputation☆85Updated 3 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆81Updated this week
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆66Updated 8 months ago
- ☆72Updated 3 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆45Updated this week
- Sequence kernel association test (SKAT)☆50Updated 4 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆94Updated 8 months ago
- ☆193Updated 3 years ago
- Development for SAIGE and SAIGE-GENE(+)☆76Updated this week
- ☆48Updated last month
- Integrative pathway enrichment analysis of multivariate omics data☆111Updated 2 weeks ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆49Updated 2 months ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆64Updated 3 months ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last week
- Enhanced version of the FastQTL QTL mapper☆66Updated 2 years ago
- Colocalization analysis of genetic association signals☆53Updated last week
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆80Updated last year
- Reading, querying and writing GWAS summary data in VCF format☆82Updated 2 weeks ago
- ☆35Updated 4 years ago
- ☆98Updated 3 years ago