☆17Feb 27, 2023Updated 3 years ago
Alternatives and similar repositories for DeepRibo
Users that are interested in DeepRibo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Deep learning tools and models for MALDI-TOF mass spectra analysis☆30Jan 19, 2026Updated 9 months ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆15Sep 26, 2017Updated 9 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Jan 26, 2022Updated 4 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆19Jul 19, 2025Updated last year
- ☆33Oct 27, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆13Mar 27, 2026Updated 7 months ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆61Jul 3, 2019Updated 7 years ago
- ☆12Aug 25, 2026Updated 2 months ago
- MayaChemTools is a growing collection of Perl and Python scripts, modules, and classes to support a variety of day-to-day computational d…☆10Sep 1, 2020Updated 6 years ago
- Ligand force matching☆12Dec 4, 2025Updated 10 months ago
- Instantaneous Metagenome Taxonomic Profiling with MetaKSSD☆27Nov 3, 2025Updated 11 months ago
- We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ri…☆15Oct 9, 2026Updated 3 weeks ago
- The tRNA adaptation index☆22Apr 25, 2025Updated last year
- Contains a fasta format database of a large variety of mobile genetic elements and an annotation file☆55Aug 16, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- This repository contains the source code of the R package for EvoGeneX, a software to infer the mode of evolution from the gene expressio…☆31Dec 1, 2025Updated 11 months ago
- ☆11Nov 30, 2025Updated 11 months ago
- GLASS consortium☆14May 31, 2022Updated 4 years ago
- A Python package that uses stratified sampling to sample the chemical space around different chemical Series.☆12Sep 19, 2026Updated last month
- ☆11Feb 9, 2024Updated 2 years ago
- Predicting cleaved peptides in protein sequences☆11Jul 3, 2024Updated 2 years ago
- 基于appium实现自动刷抖音☆13Dec 20, 2020Updated 5 years ago
- AMPDeep: Hemolytic Activity Prediction of Antimicrobial Peptides using Transfer Learning☆12Aug 15, 2022Updated 4 years ago
- 🎨 Python library to plot multi-part genetic constructs☆27Apr 9, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.☆28Nov 19, 2025Updated 11 months ago
- A tool for distinguish temperate phage-derived and virulent phage-derived sequence in metavirome data using deep learning☆30Nov 20, 2023Updated 2 years ago
- Code for "De novo molecular design with chemical language models"☆13Nov 10, 2021Updated 4 years ago
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 9 years ago
- MetaCHIP2☆11May 5, 2026Updated 5 months ago
- ☆11Oct 1, 2021Updated 5 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆54Aug 13, 2024Updated 2 years ago
- LLM-driven molecular optimization agent built with LangGraph. Iteratively proposes and refines molecules using configurable oracles and o…☆17Oct 20, 2026Updated last week
- FREE Divergence Error-Correcting DNA Barcodes☆31Feb 6, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R Package for Codon Usage Bias Analysis. Comprehensive documentation and tutorials are available at:☆13Oct 29, 2025Updated last year
- ☆17Jun 21, 2022Updated 4 years ago
- This repository contains code for evaluating the predicted uncertainty of second-order distributions, thereby comparing a "reference" res…☆11Jul 16, 2024Updated 2 years ago
- bioinformatics R test code☆16May 29, 2026Updated 5 months ago
- ☆13Apr 29, 2023Updated 3 years ago
- Scripts and instructions to apply RiboTIE on Ribo-seq data☆20Jul 22, 2025Updated last year
- Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data☆12Jun 30, 2022Updated 4 years ago