jbloomlab / dms_tools2
software for the analysis and visualization of deep mutational scanning data
☆34Updated 2 years ago
Alternatives and similar repositories for dms_tools2:
Users that are interested in dms_tools2 are comparing it to the libraries listed below
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆37Updated last week
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 4 years ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Tool for deep mutational scanning experiments.☆48Updated this week
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆30Updated last week
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆17Updated 2 years ago
- iCodon customizes gene expression based on the codon composition☆14Updated last year
- Fast and flexible ORF finder☆69Updated 3 years ago
- ☆71Updated last year
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆71Updated last week
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆34Updated 6 months ago
- UniProt Id Mapping through API☆31Updated 5 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆106Updated 4 months ago
- Software for predicting translation initiation rates in bacteria☆22Updated 3 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆121Updated 3 months ago
- snakemake pipeline for creating trees from sequence sets☆74Updated last month
- sensitive and precise assembly of short sequencing reads☆152Updated 5 months ago
- Multi-class signal peptide prediction and structure decoding model.☆83Updated last month
- The tRNA adaptation index☆15Updated 2 years ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆79Updated 2 years ago
- Python package and command line tool for epitope prediction☆51Updated 7 months ago
- ☆65Updated 2 weeks ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆42Updated 2 weeks ago
- Package to Score Sequences using Rule Set 3☆11Updated last year
- A PCR primer tool for DNA assembly flows☆30Updated 10 months ago
- ☆14Updated 8 years ago
- CRISPR Cas9 ontarget prediction software☆26Updated last week
- Public repository for ShapeMapper 2 releases☆33Updated 3 months ago
- a pipeline to build similarity maps of protein space☆33Updated 3 months ago
- Conservation analysis of homologous proteins with Python☆10Updated 3 years ago