Generate robust DNA barcode sets
☆33Feb 6, 2024Updated 2 years ago
Alternatives and similar repositories for dna-barcodes
Users that are interested in dna-barcodes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Dec 8, 2022Updated 3 years ago
- Tools for generating and decoding error-correcting DNA barcodes☆15Feb 15, 2022Updated 4 years ago
- FinalVersions☆17Apr 3, 2017Updated 9 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆29Feb 6, 2025Updated last year
- Scripts to design DropSynth oligos☆16Dec 2, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- FREE Divergence Error-Correcting DNA Barcodes☆10Jun 23, 2018Updated 7 years ago
- Identification of spatial homogeneous regions☆21Oct 6, 2025Updated 6 months ago
- Two pass alignment for long reads☆22Mar 9, 2021Updated 5 years ago
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 5 months ago
- ☆20May 24, 2025Updated 11 months ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- ☆10Jul 10, 2023Updated 2 years ago
- Padlock design pipeline for multiplexed assay with multiple probes per target in cDNA-based expression profiling☆15Jul 11, 2024Updated last year
- Analyzing chromatin accessibility data in R☆18Jun 23, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Primer Seek in RNA-Seq. Designs RT-PCR primers that validate alternative splicing events from RNA-Seq data.☆13Nov 27, 2016Updated 9 years ago
- A package to count reads mapping on transposable elements subfamilies, families and classes.☆12Feb 3, 2023Updated 3 years ago
- ☆13Apr 16, 2021Updated 5 years ago
- An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.☆38Updated this week
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 4 years ago
- End-guided RNA assembler☆15Dec 2, 2025Updated 5 months ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆36Apr 17, 2026Updated 2 weeks ago
- Scripts for analyses and figures for SNP STR Imputation manuscript☆14Jul 24, 2018Updated 7 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆35Nov 17, 2025Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ChromoZoom is a fast, fluid web-based genome browser☆48Mar 15, 2021Updated 5 years ago
- A long-read analysis toolbox for cancer and population genomics☆23Jul 1, 2025Updated 10 months ago
- Optimise PCR primer-set grouping for genetics research☆18Feb 24, 2026Updated 2 months ago
- Efficient algorithms for designing orthogonal DNA sequence libraries☆13Oct 23, 2024Updated last year
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆21Nov 27, 2025Updated 5 months ago
- rnalib: a python-based transcriptomics library☆11Jan 23, 2026Updated 3 months ago
- R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…☆15Feb 19, 2025Updated last year
- R package to quickly obtain count vectors from indexed bam files☆15Jun 13, 2025Updated 10 months ago
- viralComplete: BLAST-based viral completeness verification☆23Oct 4, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A collection of useful functions for bioinformatics data analysis☆26Mar 19, 2026Updated last month
- GpC methylation from fast5:s to reference anchored calls☆10Nov 18, 2020Updated 5 years ago
- Empirical Bayes methods for single cell data☆17Oct 12, 2020Updated 5 years ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆21Dec 19, 2025Updated 4 months ago
- ☆14Dec 22, 2025Updated 4 months ago
- GenBank taxonomy processing tools☆15Jun 30, 2018Updated 7 years ago
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 3 years ago