HaolingZHANG / DNASpiderWeb
SPIDER-WEB generates coding algorithms with superior error tolerance and real-time information retrieval capacity
☆9Updated 7 months ago
Alternatives and similar repositories for DNASpiderWeb:
Users that are interested in DNASpiderWeb are comparing it to the libraries listed below
- BGI DNA Storage Kit☆38Updated last week
- Xron - an omni basecaller for ONT reads.☆20Updated last month
- ☆12Updated last year
- Predictive kmer models for development use☆54Updated last year
- Read Until client library for Nanopore Sequencing☆103Updated 3 months ago
- DInoPORE: Direct detection of INOsines in native RNA with nanoPORE sequencing☆17Updated last year
- Program designed for DNA storage using Yin-Yang transcoding algorithm☆24Updated 8 months ago
- Oxford Nanopore Technologies fast5 API software☆152Updated 10 months ago
- DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using Nanopore direct RNA sequencing☆17Updated last year
- ☆14Updated last year
- Codec for DNA data storage able to correct substitutions, deletions, insertions and fragment loss with constraint adherence.☆13Updated last week
- SegPore is a software to segment the raw signal of nanopore direct RNA sequencing and estimate the RNA modifications.☆9Updated 3 months ago
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆27Updated this week
- Detecting methylation using signal-level features from Nanopore sequencing reads☆112Updated last year
- Using Deep Learning to predict gene annotations☆176Updated this week
- Codes and results from ONT dRNA benchmarking☆11Updated last year
- Fast and flexible ORF finder☆65Updated 3 years ago
- A python program to call methylation (m6A in DNA) from nanopore signal data☆45Updated 3 years ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆65Updated 2 weeks ago
- a long read simulator that can imitate many types of read problems☆195Updated 5 months ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆38Updated 2 months ago
- geNomad: Identification of mobile genetic elements☆206Updated this week
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆147Updated 2 months ago
- Bioinformatics tool for Locus Visualisation☆83Updated this week
- a tool for inferring species tree from sequencing reads☆146Updated last month
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆11Updated 3 months ago
- Research release basecalling models and configurations☆104Updated 7 months ago
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆106Updated 2 weeks ago
- Exploring the "dusk matter" of the RNA virosphere☆35Updated 2 years ago