Alternatives and similar repositories for DNASpiderWeb

Users that are interested in DNASpiderWeb are comparing it to the libraries listed below

• mem3nto0 / ModiDeC-RNA-modification-classifier
  ☆11Updated last month
• BHam-1 / DNArSim
  DNA Archive Simulator (DNArSim) is a memory channel model that simulate the entire DNA Data Storage process: from synthesis to basecallin…
  ☆8Updated 3 years ago
• Guanjinqu / Clover
  An Efficient DNA Clustering algorithm based on Tree Structure.
  ☆16Updated 2 years ago
• xieyy46 / SingleMod-v1
  ☆11Updated last month
• biodlab / RODAN
  A fully convolutional architecture for basecalling nanopore RNA sequencing data
  ☆11Updated 10 months ago
• darelab2014 / Dinopore
  DInoPORE: Direct detection of INOsines in native RNA with nanoPORE sequencing
  ☆18Updated 2 years ago
• haotianteng / Xron
  Xron - an omni basecaller for ONT reads.
  ☆22Updated 8 months ago
• weir12 / DeepEdit
  DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using Nanopore direct RNA sequencing
  ☆17Updated 2 years ago
• ntpz870817 / Chamaeleo
  BGI DNA Storage Kit
  ☆43Updated 6 months ago
• EddyRivasLab / infernal
  RNA secondary structure/sequence profiles for homology search and alignment
  ☆112Updated 8 months ago
• marcpaga / basecalling_architectures
  ☆15Updated last year
• sihaohuanguc / NanoSPA
  ☆14Updated last year
• ntpz870817 / DNA-storage-YYC
  Program designed for DNA storage using Yin-Yang transcoding algorithm
  ☆28Updated last year
• liqingwen98 / BaseNet
  BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding
  ☆12Updated 4 months ago
• mmcguffi / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆123Updated last week
• PengNi / deepsignal-plant
  Detecting methylation using signal-level features from Nanopore sequencing reads of plants
  ☆61Updated last year
• guangzhaocs / SegPore
  SegPore is a software to segment the raw signal of nanopore direct RNA sequencing and estimate the RNA modifications.
  ☆12Updated last month
• GSLBiotech / mafft
  Align multiple amino acid or nucleotide sequences.
  ☆61Updated 4 years ago
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆136Updated 7 months ago
• liyu95 / DeepSimulator
  The first deep learning based Nanopore simulator which can simulate the process of Nanopore sequencing.
  ☆121Updated 4 years ago
• JanaSperschneider / EffectorP-3.0
  Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes
  ☆22Updated 3 years ago
• rcedgar / muscle
  Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…
  ☆249Updated last month
• WGLab / DeepMod
  DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications
  ☆104Updated 2 years ago
• ncbi / egapx
  Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
  ☆146Updated last week
• institut-de-genomique / BoardION
  ☆11Updated 4 years ago
• weberlab-hhu / Helixer
  Using Deep Learning to predict gene annotations
  ☆207Updated last month
• ZKI-PH-ImageAnalysis / seq2squiggle
  End-to-end simulation of nanopore sequencing signals with feed-forward transformers
  ☆12Updated last month
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆94Updated 11 months ago
• inab / trimal
  A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
  ☆216Updated this week
• Russel88 / CRISPRCasTyper
  CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
  ☆102Updated last year