SSDL-SNU / DeepSNUPILinks
Computational analysis of nucleic acids structures using graph neural networks
☆14Updated last year
Alternatives and similar repositories for DeepSNUPI
Users that are interested in DeepSNUPI are comparing it to the libraries listed below
Sorting:
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆111Updated 2 years ago
- Generative method to design novel proteins using a diffusion model☆43Updated 2 years ago
- ☆133Updated 8 months ago
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆207Updated 9 months ago
- ☆212Updated last year
- Masif seed paper repository☆173Updated 4 months ago
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆126Updated 2 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆182Updated 2 weeks ago
- List of molecules (small molecules, RNA, peptide, protein, enzymes, antibody, and PPIs) conformations and molecular dynamics (force fie…☆277Updated 2 weeks ago
- ☆138Updated 7 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆47Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆103Updated 2 years ago
- A Unified Evaluation Suite for Protein Design☆125Updated 2 weeks ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆155Updated 2 years ago
- ☆41Updated 2 years ago
- Official Implementation of IgGM☆179Updated 2 months ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆82Updated last year
- Official repository of EnzymeFlow☆98Updated last year
- ☆118Updated last month
- ☆46Updated last year
- open source code for Tencent tFold☆142Updated 10 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆125Updated 11 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆106Updated 9 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆71Updated 10 months ago
- ☆54Updated last year
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆146Updated 8 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆82Updated 8 months ago
- Official implementation of CP-Composer. It is the released code of 《Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints》…☆22Updated 6 months ago
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆126Updated 5 months ago
- ☆84Updated 8 months ago