SSDL-SNU / DeepSNUPILinks
Computational analysis of nucleic acids structures using graph neural networks
☆13Updated last year
Alternatives and similar repositories for DeepSNUPI
Users that are interested in DeepSNUPI are comparing it to the libraries listed below
Sorting:
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆111Updated 2 years ago
- List of molecules (small molecules, RNA, peptide, protein, enzymes, antibody, and PPIs) conformations and molecular dynamics (force fie…☆262Updated last week
- ☆205Updated last year
- ☆42Updated 2 years ago
- MSA Transformer reproduction code☆86Updated 4 years ago
- ☆81Updated 6 months ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 8 months ago
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆120Updated last year
- ☆46Updated last year
- Graph Network for protein-protein interface☆120Updated last year
- ☆117Updated 5 months ago
- Generative method to design novel proteins using a diffusion model☆43Updated 2 years ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆118Updated this week
- SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction☆220Updated 2 months ago
- ☆45Updated 3 months ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆149Updated 2 years ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆141Updated 6 months ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆68Updated last week
- Pretrainable geometric graph neural network for antibody affinity maturation☆66Updated 8 months ago
- Official repository of EnzymeFlow☆97Updated 11 months ago
- Masif seed paper repository☆164Updated 2 months ago
- ☆51Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆120Updated last week
- ☆128Updated 5 months ago
- Source code for "A universal framework for accurate and efficient geometric deep learning of molecular systems" (Nature Scientific Report…☆72Updated 2 weeks ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆225Updated last year
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆203Updated 7 months ago
- Dataset and package for working with protein-protein interactions in 3D☆96Updated 7 months ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆33Updated 4 months ago
- Official repository of ReactZyme☆36Updated last year