ElofssonLab / PconsC2Links
Improved contact predictions using the recognition of protein like contact patterns.
☆14Updated 7 years ago
Alternatives and similar repositories for PconsC2
Users that are interested in PconsC2 are comparing it to the libraries listed below
Sorting:
- ☆14Updated 9 years ago
- Tools for munging genomic data☆21Updated 5 years ago
- A method for identifying deleterious protein variation.☆11Updated 8 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆31Updated 7 years ago
- A Python workflow to study protein-protein coevolution and interaction☆21Updated 7 years ago
- 🧛 Deep generative models for TCR sequences 🧛☆17Updated 3 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Updated 8 years ago
- Signaling Pathway Visualizer☆9Updated 5 years ago
- An algorithm for error-correction of immunosequencing Illumina MiSeq reads and immunoproteogenomic analysis☆18Updated 6 years ago
- A Python API for managing genotype-phenotype map data☆11Updated last year
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆17Updated 5 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 5 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 4 months ago
- DeepContact Software☆26Updated 6 years ago
- Python interface to amino acid properties and IEDB☆56Updated 7 months ago
- A platform to do RNA science☆27Updated 4 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆34Updated last year
- Analysis of antibody NGS data☆12Updated 3 years ago
- Computational biology utility scripts☆19Updated last month
- Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module☆22Updated 3 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- ☆10Updated 6 years ago
- We present Envision, an accurate predictor of protein variant molecular effect, trained using large-scale experimental mutagenesis data. …☆17Updated 7 years ago
- Python package to plot sequence logos☆29Updated last year
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- kClust is a fast and sensitive clustering method for the clustering of protein sequences. It is able to cluster large protein databases d…☆18Updated 6 years ago
- Protein Sequence Annotation with Language Models☆20Updated last week
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated last year
- MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences☆14Updated 3 years ago