jbloomlab / alignparseLinks
Align sequences and then parse features.
☆18Updated 2 months ago
Alternatives and similar repositories for alignparse
Users that are interested in alignparse are comparing it to the libraries listed below
Sorting:
- k-mer similarity analysis pipeline☆21Updated 3 weeks ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆21Updated last year
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 7 years ago
- Universal RObust Peak Annotator☆16Updated last year
- Annotating principal splice isoforms☆14Updated 8 months ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 4 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆52Updated 7 years ago
- Tools for generating and decoding error-correcting DNA barcodes☆16Updated 3 years ago
- http://www.combio.pl/alfree☆23Updated 3 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- ☆25Updated 4 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆28Updated last year
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆32Updated last year
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated 2 weeks ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 10 months ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Updated 6 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 6 months ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago
- Bioinformatics Open Source Sequence machine☆33Updated last year
- A genome browser in your Jupyter notebook☆31Updated last month
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- Library for indexing VCF files for random access searches by rsID☆17Updated last year
- ☆20Updated last month
- ☆26Updated 4 months ago
- This BLENDER has been sunsetted☆16Updated 8 months ago
- Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)☆10Updated 3 years ago