Alternatives and similar repositories for lab-manuscript-template

Users that are interested in lab-manuscript-template are comparing it to the libraries listed below

• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆28Updated 4 months ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆35Updated last year
• snystrom / memes
  An R interface to the MEME Suite
  ☆52Updated 4 months ago
• js2264 / tidyCoverage
  ☆22Updated last week
• 123xiaochen / VCFshiny
  ☆29Updated last year
• dsurujon / ShinyOmics
  Exploration of Omics data
  ☆25Updated 4 years ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆26Updated 2 weeks ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated this week
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• grimmlab / BookChapter-RNA-Seq-Analyses
  Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis
  ☆40Updated 4 years ago
• sonali-bioc / UncertaintyRNA
  This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…
  ☆29Updated last year
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 6 years ago
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆66Updated last year
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆55Updated 2 years ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆30Updated 7 months ago
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated 2 weeks ago
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• gtonkinhill / TCGA_analysis
  ☆27Updated 2 years ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆20Updated 8 years ago
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆29Updated 10 years ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆34Updated 3 months ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆44Updated 7 months ago
• Huber-group-EMBL / biomaRt
  R package providing query functionality to BioMart instances like Ensembl
  ☆43Updated this week
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆57Updated 9 months ago
• Roleren / ORFik
  ☆34Updated last week
• cxli233 / customized_upset_plots
  Make customized upset plots: from raw data to plots
  ☆61Updated last month
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆21Updated last month