Code for the in-dev PrediXcan Project
☆28Oct 17, 2022Updated 3 years ago
Alternatives and similar repositories for TO-DELETE-PrediXcan
Users that are interested in TO-DELETE-PrediXcan are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PredictDB Pipeline for GTEx v7 data☆18Nov 9, 2022Updated 3 years ago
- ☆40Jan 24, 2018Updated 8 years ago
- Canonical SGE cluster genotype imputation pipeline☆11Jan 18, 2016Updated 10 years ago
- software package for integrative genetic association analysis☆38Jul 8, 2023Updated 3 years ago
- ☆15Dec 7, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆10Jan 20, 2023Updated 3 years ago
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 12 years ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆198Apr 22, 2026Updated 5 months ago
- Repository to ZIP Plink2 LD files and have random access☆17Aug 12, 2026Updated 2 months ago
- Functional genomics and genome-wide association studies☆70Jul 24, 2018Updated 8 years ago
- R script that performs gene-set or gene property analysis using TWAS results.☆34Sep 27, 2026Updated 2 weeks ago
- methods for functional summary-based imputation☆112Mar 17, 2026Updated 6 months ago
- Genetics ToolboX R package☆32Feb 10, 2020Updated 6 years ago
- WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery☆112Apr 23, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆97Jul 25, 2023Updated 3 years ago
- PrediXcan Project☆121Oct 17, 2022Updated 3 years ago
- Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape☆10Jun 11, 2022Updated 4 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- Original materials for the "Introduction to Solving Biological Problems with Python" 2 days course☆10Jun 25, 2018Updated 8 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- Harmonise GWAS summary statistics against a reference VCF☆40Jun 15, 2021Updated 5 years ago
- Statistical fine-mapping pipeline in FinnGen☆35Aug 14, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆23Aug 28, 2026Updated last month
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆17Jun 24, 2025Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Feb 27, 2020Updated 6 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆216Jul 6, 2023Updated 3 years ago
- Enhanced version of the FastQTL QTL mapper☆73Mar 19, 2023Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- ☆104Jul 29, 2026Updated 2 months ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 5 years ago
- Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…☆12Jun 10, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 3D GWAS across multiple phenotypes☆13Oct 11, 2022Updated 4 years ago
- Code for implementing Mendelian randomization investigations☆22Nov 9, 2015Updated 10 years ago
- Applying polygenic scores (PGS) on imputed genotypes☆36Oct 28, 2025Updated 11 months ago
- R wrapper for a Java Bayesian GLM variable selection package☆18Feb 7, 2020Updated 6 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆23Jul 9, 2026Updated 3 months ago
- GEAR [GEnetic Analysis Repository], contact chenguobo@gmail.com;☆21Dec 31, 2021Updated 4 years ago
- Pariwise analysis of GWAS☆48Sep 27, 2018Updated 8 years ago