Python command line tool for Multi-Trait Analysis of GWAS (MTAG)
☆217Jul 6, 2023Updated 3 years ago
Alternatives and similar repositories for mtag
Users that are interested in mtag are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- LD Score Regression (LDSC)☆804Jan 16, 2026Updated 9 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆60Apr 8, 2024Updated 2 years ago
- Pariwise analysis of GWAS☆48Sep 27, 2018Updated 8 years ago
- ☆93Jul 28, 2026Updated 3 months ago
- Causal Mixture Model for GWAS summary statistics☆102Dec 17, 2025Updated 10 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- R-package for structural equation modeling based on GWAS summary data☆303Sep 28, 2026Updated last month
- High-definition likelihood inference of genetic correlations (HDL)☆144Sep 13, 2026Updated last month
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆46Sep 18, 2025Updated last year
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆40Jun 3, 2025Updated last year
- Meta-analysis of genomewide association scans☆69Jul 18, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆103Jul 21, 2025Updated last year
- A collection of various utilities for GWAS summary statistics☆35May 14, 2024Updated 2 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆66Aug 25, 2026Updated 2 months ago
- ☆42Jan 20, 2021Updated 5 years ago
- MetaXcan software and manuscript☆204Sep 9, 2026Updated last month
- Polygenic prediction via continuous shrinkage priors☆218Oct 9, 2026Updated 3 weeks ago
- ☆40Jun 15, 2023Updated 3 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆64Feb 12, 2021Updated 5 years ago
- ☆57Jan 16, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆34Oct 18, 2021Updated 5 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆43Apr 26, 2024Updated 2 years ago
- ☆199May 2, 2022Updated 4 years ago
- Manhattan++☆29Feb 13, 2024Updated 2 years ago
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆394Jun 7, 2023Updated 3 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated last year
- Software to infer latent pleiotropic components from GWAS summary data☆18Jan 30, 2025Updated last year
- ☆23Sep 1, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Fast, integrative fine mapping with functional data☆65Aug 22, 2019Updated 7 years ago
- Software for estimating correlation of trait effect sizes across populations☆62May 30, 2025Updated last year
- Software implementing the Latent Causal Variable Model☆69Jun 30, 2020Updated 6 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- Repo for the R package coloc☆213Updated this week
- Pair-wise conditional analysis and colocalisation☆44May 2, 2024Updated 2 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆143Dec 9, 2024Updated last year