R/Shiny application for viewing microbial community data
☆19Dec 17, 2020Updated 5 years ago
Alternatives and similar repositories for Seed
Users that are interested in Seed are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- ARCHIVED Interface to USDA Databases☆13Mar 9, 2026Updated 5 months ago
- The code and distributable for designing minimal microbial communities with specified metabolic functions.☆11Aug 9, 2017Updated 9 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- ☆11Apr 3, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline☆13Feb 10, 2026Updated 6 months ago
- Interactive tools for metagenome visualization and binning in R☆27Jun 28, 2018Updated 8 years ago
- X things you should take into consideration if you code for big data analysis☆23May 29, 2018Updated 8 years ago
- rapport is an R package that facilitates the creation of reproducible statistical report templates☆49Apr 7, 2025Updated last year
- Reproducible Phylogenomics☆22Jun 28, 2016Updated 10 years ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 10 years ago
- in silico plasmid extraction☆13Sep 18, 2017Updated 8 years ago
- Hover.css Animations for 'shiny' Buttons☆15Mar 19, 2021Updated 5 years ago
- Talk on reproducible research at SURF: http://www.meetup.com/R-Users-Sydney/events/199742542/☆27Dec 2, 2014Updated 11 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Presentation and exercises for the Software Sustainability Institute Research Data Visualisation Workshop (RDVW)☆15Apr 10, 2018Updated 8 years ago
- Identification of structural variations☆12Jul 22, 2022Updated 4 years ago
- NExt generation Analysis Toolbox☆14Oct 18, 2015Updated 10 years ago
- ☆18Nov 16, 2015Updated 10 years ago
- Interactive Visualizations with rCharts and Shiny☆21Sep 13, 2015Updated 10 years ago
- Teaching materials for classes teaching programming to biologists☆55Jun 30, 2023Updated 3 years ago
- lucy is a wrapper for the popular igraph package that is useful for building graphical models.☆18Apr 17, 2016Updated 10 years ago
- initial commit☆27Dec 29, 2022Updated 3 years ago
- Drive web browser content from R☆13Dec 16, 2018Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A tool to construct repeats directly from raw reads☆17May 29, 2021Updated 5 years ago
- micca - MICrobial Community Analysis☆19Feb 12, 2020Updated 6 years ago
- Maximum Likelihood Amplicon Pipeline☆22Jul 16, 2026Updated last month
- Browse worldwide birding locations and sightings, based on ebird.org data☆15Jan 27, 2023Updated 3 years ago
- R package for user friendly Facebook scraping☆10Jul 6, 2017Updated 9 years ago
- Short example showing how to calculate and plot a 2D t-SNE projection from mass cytometry data in R☆17Nov 9, 2015Updated 10 years ago
- Package to standardize country names and set Correlate of War IDs☆12Jun 10, 2026Updated 2 months ago
- an open-source pipeline for Affymetrix Axiom genotyping workflow on livestock species☆15Jul 22, 2016Updated 10 years ago
- Rebuild of AskOmics☆14Aug 10, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Error correction for Oxford Nanopore data☆47May 29, 2021Updated 5 years ago
- Ergatis is a web-based utility that is used to create, run, and monitor reusable computational analysis pipelines.☆16Jan 4, 2023Updated 3 years ago
- SPADEVizR: an R package for Visualization, Analysis and Integration of SPADE results.☆17Dec 5, 2023Updated 2 years ago
- Explore spaces of phylogenetic trees☆30Aug 28, 2025Updated last year
- Materials related to events I might attend, and to talks I am giving☆24Aug 15, 2026Updated 2 weeks ago
- vov.css animations for shiny☆23Sep 1, 2020Updated 5 years ago
- Bacterial phylogenetics in BEAST 2.☆18Mar 30, 2023Updated 3 years ago