opentargets / genetics-sumstat-harmoniserLinks
Harmonise GWAS summary statistics against a reference VCF
☆41Updated 3 years ago
Alternatives and similar repositories for genetics-sumstat-harmoniser
Users that are interested in genetics-sumstat-harmoniser are comparing it to the libraries listed below
Sorting:
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 3 weeks ago
- Colocalization analysis of genetic association signals☆53Updated 3 weeks ago
- GWAS Summary Statistics Data Harmonisation☆23Updated 4 months ago
- ☆35Updated 4 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆50Updated 4 years ago
- Software for estimating correlation of trait effect sizes across populations☆46Updated last week
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆63Updated 7 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Sequence kernel association test (SKAT)☆50Updated 3 months ago
- ☆32Updated last year
- ☆22Updated last year
- Genotype-based Prediction (GenoPred)☆72Updated 2 weeks ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- ☆47Updated 2 weeks ago
- Partners Biobank genomics data QC☆26Updated 5 years ago
- methods for functional summary-based imputation☆85Updated 3 years ago
- Main ricopili repo for public releases☆48Updated last month
- Development for SAIGE and SAIGE-GENE(+)☆76Updated last week
- Pariwise analysis of GWAS☆43Updated 6 years ago
- Regional association plots☆25Updated last year
- Functional genomics and genome-wide association studies☆67Updated 6 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆29Updated last year
- ☆35Updated 9 months ago
- Cross-population polygenic prediction☆82Updated 6 months ago
- Fast, integrative fine mapping with functional data☆58Updated 5 years ago
- R package for quality control of plink genetic datasets☆59Updated 3 weeks ago
- software package for integrative genetic association analysis☆34Updated last year