statgen / phewebLinks
A tool to build a website to browse hundreds or thousands of GWAS.
☆185Updated last week
Alternatives and similar repositories for pheweb
Users that are interested in pheweb are comparing it to the libraries listed below
Sorting:
- regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.☆229Updated 3 months ago
- ☆194Updated 3 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆124Updated 9 months ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆174Updated 9 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆197Updated 2 years ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆199Updated last year
- PrediXcan Project☆112Updated 2 years ago
- MetaXcan software and manuscript☆173Updated 2 months ago
- ☆98Updated 3 years ago
- Ultrafast GPU-enabled QTL mapper☆190Updated 2 months ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Linear mixed model for genomic analyses.☆107Updated 4 years ago
- Repo for the R package coloc☆174Updated last month
- Cross-population polygenic prediction☆90Updated 9 months ago
- A tutorial on how to run basic polygenic risk score analysis☆81Updated 2 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆234Updated 2 weeks ago
- Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF☆156Updated last month
- Codebook from my GWAS cookbook☆193Updated 3 years ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆69Updated 3 months ago
- Polygenic prediction via continuous shrinkage priors☆189Updated 9 months ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆116Updated this week
- Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae …☆224Updated last year
- The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation☆145Updated last month
- High-definition likelihood inference of genetic correlations (HDL)☆122Updated 2 months ago
- ☆180Updated 2 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆86Updated 3 weeks ago
- Linking GWAS data to analytical tools in R☆145Updated 3 years ago
- A SingleCell RNASeq pre-processing snakemake workflow☆148Updated 2 years ago
- methods for functional summary-based imputation☆88Updated 3 years ago
- Rare variant test software for next generation sequencing data☆140Updated 3 years ago