☆64Dec 30, 2021Updated 4 years ago
Alternatives and similar repositories for caviar
Users that are interested in caviar are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- software package for integrative genetic association analysis☆36Jul 8, 2023Updated 2 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- Colocalization analysis of genetic association signals☆56Jun 13, 2025Updated 9 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated last year
- ☆57Jan 16, 2025Updated last year
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Dec 16, 2020Updated 5 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 7 months ago
- ☆14Jun 24, 2024Updated last year
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Estimate genetic correlation using predicted expression☆25Mar 8, 2018Updated 8 years ago
- Causal Mixture Model for GWAS summary statistics☆96Dec 17, 2025Updated 3 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆16Oct 7, 2025Updated 5 months ago
- ☆21Aug 20, 2024Updated last year
- ☆30Oct 18, 2021Updated 4 years ago
- ☆93Jul 21, 2025Updated 8 months ago
- ☆13Oct 1, 2025Updated 5 months ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Jun 4, 2024Updated last year
- An accurate and efficient colocalization method accounting for multiple causal signals☆13Jun 3, 2024Updated last year
- Pariwise analysis of GWAS☆46Sep 27, 2018Updated 7 years ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated last year
- Regional association plots☆26Apr 1, 2024Updated last year
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆12Aug 8, 2025Updated 7 months ago
- Manhattan++☆29Feb 13, 2024Updated 2 years ago
- Multi-Trait Genome-Wide Association Analysis☆19Dec 19, 2023Updated 2 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆27Dec 10, 2025Updated 3 months ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Mar 27, 2021Updated 4 years ago
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆44Oct 23, 2025Updated 5 months ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- Repo for the R package coloc☆190Dec 4, 2025Updated 3 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Mar 30, 2021Updated 4 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆20Aug 10, 2021Updated 4 years ago