Convert GWAS summary statistics to VCF
☆48Apr 13, 2026Updated 3 weeks ago
Alternatives and similar repositories for gwas2vcf
Users that are interested in gwas2vcf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Statistical fine-mapping pipeline in FinnGen☆32Oct 3, 2025Updated 7 months ago
- GWAS summary statistics files QC tool☆42Dec 24, 2024Updated last year
- R package for epigraphdb☆29Jul 6, 2024Updated last year
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 6 months ago
- RSparsePro for robust fine-mapping in the presence of LD mismatch☆15Nov 4, 2024Updated last year
- Linking GWAS data to analytical tools in R☆156May 20, 2022Updated 3 years ago
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated 2 months ago
- Documentation on new GWAS Summary Statistics Standard☆24Nov 19, 2025Updated 5 months ago
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated 11 months ago
- Leveraging functional information to improve GWAS summary statistic imputation☆20Aug 10, 2021Updated 4 years ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 3 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…☆11Jun 10, 2019Updated 6 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆40Sep 18, 2025Updated 7 months ago
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- vgraph is a command line application and Python library to compare genetic variants using variant graphs. ``vgraph`` utilizes a graph re…☆43Sep 16, 2021Updated 4 years ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 7 months ago
- Proteome-Wide Association Study☆50Apr 4, 2021Updated 5 years ago
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated last year
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆34Jan 28, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Jun 4, 2024Updated last year
- ☆15Apr 20, 2021Updated 5 years ago
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆42Oct 31, 2025Updated 6 months ago
- ☆58Apr 26, 2026Updated last week
- GWAS for survival analysis in large cohorts☆22Jul 24, 2024Updated last year
- Make LocusZoom-like plots with your own LD matrix.☆50Jul 17, 2022Updated 3 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆55Mar 27, 2026Updated last month
- https://jinghuazhao.github.io/pQTLtools/☆23Mar 25, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13Jun 15, 2022Updated 3 years ago
- GWAS genetics Fine-mapping method☆27Oct 16, 2024Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆41Jun 15, 2021Updated 4 years ago
- An accurate and efficient colocalization method accounting for multiple causal signals☆13Jun 3, 2024Updated last year
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Sep 26, 2024Updated last year
- genetic correlation between phenotypes in the UK biobank☆14Feb 22, 2024Updated 2 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆16Jan 30, 2025Updated last year