Patchouli-M / SequencingCancerFinderLinks
☆37Updated 4 months ago
Alternatives and similar repositories for SequencingCancerFinder
Users that are interested in SequencingCancerFinder are comparing it to the libraries listed below
Sorting:
- ☆20Updated 3 years ago
- The current study provides a comprehensive insights into the PDAC metastatic biology.☆21Updated last year
- These are scripts for pan-cacner B cells analyses.☆54Updated last year
- ☆59Updated last year
- ☆40Updated 2 years ago
- Spatial Cellular Estimator for Tumors☆57Updated last month
- ☆25Updated last year
- Construct Tumor Transition Zone Microenvironment☆49Updated 3 months ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆126Updated last year
- scRNA-seq analysis of EENT-ONB☆22Updated last year
- Codes for the scPLC project☆68Updated 2 years ago
- ☆22Updated 11 months ago
- ☆26Updated last year
- Spatial Transcriptomic Analysis of OSCC samples☆26Updated 2 years ago
- RA Synovial Single-cell Multimodal Cell Atlas☆18Updated last year
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Updated last year
- Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using h…☆96Updated 3 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆32Updated 5 months ago
- This repository includes codes and data example used in the "Integrative Spatial Analysis Reveals Tumor Heterogeneity and Immune Colon…☆14Updated 4 months ago
- Gene group activity utility functions for Scanpy☆90Updated 9 months ago
- ☆125Updated 3 years ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆120Updated 4 months ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆51Updated 4 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆38Updated 4 years ago
- ☆42Updated 2 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆36Updated 8 months ago
- ☆31Updated 7 months ago
- ☆31Updated 3 years ago
- These are scripts for pan-cacner NK cells analyses.☆72Updated 2 years ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆17Updated 3 years ago