ddhb / Workflow_of_ChIPSeqLinks
R code in workflow of chip-seq analysis
☆11Updated 6 years ago
Alternatives and similar repositories for Workflow_of_ChIPSeq
Users that are interested in Workflow_of_ChIPSeq are comparing it to the libraries listed below
Sorting:
- Bayesian network plot for the enrichment analysis results☆66Updated last year
- Multiscale embedded gene co-expression network analysis☆57Updated 2 years ago
- 🧬 Gene analysis toolkit based on R☆61Updated last year
- ☆48Updated last year
- GLASS consortium☆42Updated 5 years ago
- Homologous recombination deficiency in TCGA PanCancer Atlas☆29Updated 5 years ago
- Transcriptomics Visualization R package.☆76Updated 9 months ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 5 years ago
- ☆30Updated 7 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆63Updated 2 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆68Updated 2 years ago
- An R package to time somatic mutations☆65Updated 5 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 5 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆83Updated 8 months ago
- An integrated platform for modeling gene-regulatory dynamics and networks☆32Updated 2 months ago
- Filtering of PDX samples for mouse derived reads☆28Updated 3 weeks ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- An elegant package to visualize gene structures☆83Updated 2 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆53Updated 3 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆39Updated 2 years ago
- ☆20Updated 3 years ago
- collection of notebooks with different cytoscape workflows☆50Updated 2 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆54Updated 7 years ago
- An R package to plot maps of clone distributions in somatic evolution☆19Updated 2 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆99Updated last year
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Updated 8 years ago
- ☆90Updated 5 months ago