DavisLaboratory / vissELinks
An R/Bioconductor package to identify higher-order molecular phenotypes
☆16Updated last year
Alternatives and similar repositories for vissE
Users that are interested in vissE are comparing it to the libraries listed below
Sorting:
- ☆17Updated last year
- ☆32Updated 7 months ago
- ☆29Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆86Updated 3 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆43Updated 3 weeks ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- scWGCNA☆61Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last week
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆46Updated last year
- ☆56Updated last year
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆19Updated last month
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- ☆47Updated 7 months ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆51Updated 2 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- ☆55Updated 4 years ago
- A repository for benchmarking spatial deconvolution and mapping tools☆34Updated 3 months ago
- ☆39Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 4 months ago
- Pan-Cancer Single Cell Classifier☆77Updated last year
- ☆44Updated 9 months ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 2 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- iterative clustering pipeline of big single cell datasets.☆33Updated last week