Alternatives and similar repositories for task-execution-schemas

Users that are interested in task-execution-schemas are comparing it to the libraries listed below

• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆85Updated 3 weeks ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆31Updated this week
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 2 months ago
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆69Updated last week
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆41Updated 2 years ago
• ga4gh / data-repository-service-schemas
  A repository for the schemas used for the Data Repository Service.
  ☆63Updated 3 weeks ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated last year
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆98Updated 7 years ago
• ohsu-comp-bio / cwl-tes
  cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
  ☆18Updated 2 years ago
• chanzuckerberg / miniwdl
  Workflow Description Language developer tools & local runner
  ☆192Updated 2 weeks ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆97Updated 2 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 2 years ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated 2 years ago
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated this week
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆42Updated this week
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• rabix / bunny
  [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
  ☆74Updated 4 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆79Updated 5 months ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 5 years ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 9 months ago
• elixir-cloud-aai / TESK
  GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes
  ☆43Updated 7 months ago
• common-workflow-language / workflow-service
  Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows
  ☆36Updated 3 weeks ago
• bioconda / bioconda-utils
  Utilities for building and managing bioconda recipes
  ☆103Updated last week
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆24Updated 3 weeks ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• common-workflow-lab / wdl-cwl-translator
  A translator from WDL to CWL v1.2
  ☆27Updated 2 weeks ago
• seqeralabs / nf-tower
  Nextflow Tower system
  ☆151Updated 6 months ago