ga4gh / task-execution-schemas
☆83Updated this week
Alternatives and similar repositories for task-execution-schemas:
Users that are interested in task-execution-schemas are comparing it to the libraries listed below
- The WES API is a standard way to run and manage portable workflows.☆83Updated 4 months ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated 3 months ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 7 months ago
- A repository for the schemas used for the Data Repository Service.☆60Updated 2 weeks ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆70Updated 2 months ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated last year
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆40Updated last month
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆18Updated last year
- GA4GH Variation Representation Python Implementation☆53Updated this week
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆22Updated 2 years ago
- WDL plugin for pytest☆48Updated last year
- ☆11Updated 8 years ago
- A collection of reusable WDL tasks. Category:Other☆85Updated last week
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆77Updated 6 months ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last month
- Galaxy Admin Training☆60Updated 2 months ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆42Updated last year
- Workflow Description Language developer tools & local runner☆181Updated 6 months ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated 7 months ago
- conda recipes for genomic data☆85Updated 3 years ago
- CLI for interacting with Cromwell servers☆53Updated 10 months ago
- An app store for scientific workflows, tools, notebooks, and services☆124Updated this week
- Utilities for building and managing bioconda recipes☆99Updated 2 weeks ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Testing building mulled containers for multi-requirement tools.☆70Updated this week
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Rich IDE support for Workflow Description Language☆42Updated 7 months ago
- WDL and CWL compiler for the DNAnexus platform☆32Updated this week