Alternatives and similar repositories for bunny

Users that are interested in bunny are comparing it to the libraries listed below

• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆42Updated 2 years ago
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 7 years ago
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated this week
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated 9 months ago
• bcbio / bcbio-nextgen-vm
  Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines
  ☆67Updated 5 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• BioContainers / specs
  BioContainers specifications
  ☆52Updated 2 years ago
• bioboxes / rfc
  Request for comments on interchangeable bioinformatics containers
  ☆39Updated 6 years ago
• liyao001 / BioQueue
  A novel pipeline framework to accelerate bioinformatics analysis
  ☆30Updated 2 months ago
• konradjk / exac_browser
  Browser for ExAC consortium data
  ☆106Updated 3 years ago
• bioinform / varsim
  VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
  ☆90Updated last year
• ga4gh / task-execution-schemas
  ☆92Updated last week
• biothings / myvariant.info
  MyVariant.info: A BioThings API for human variant annotations
  ☆96Updated 3 months ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• KHP-Informatics / ngseasy
  Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)
  ☆86Updated 8 years ago
• Intel-HLS / GenomicsDB
  GenomicsDB
  ☆110Updated 2 years ago
• roryk / tiny-test-data
  Super small biological datasets for unit testing
  ☆62Updated 6 years ago
• arq5x / cyvcf
  A fast Python library for VCF files leveraging Cython for speed.
  ☆52Updated 7 years ago
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆75Updated 2 months ago
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆47Updated last month
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 4 years ago
• BD2KGenomics / cgl-docker-lib
  ☆21Updated 6 years ago
• ryanlayer / gqt
  A genotype query interface.
  ☆136Updated 4 years ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆35Updated 6 months ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago