Alternatives and similar repositories for bunny:

Users that are interested in bunny are comparing it to the libraries listed below

• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆98Updated 7 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated last month
• bioinform / varsim
  VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
  ☆82Updated 5 months ago
• ekg / fastahack
  utilities for indexing and sequence extraction from FASTA files
  ☆59Updated 3 years ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• bioboxes / rfc
  Request for comments on interchangeable bioinformatics containers
  ☆40Updated 5 years ago
• broadinstitute / gatk-protected
  Obsolete/Legacy GATK repository -- go to https://github.com/broadinstitute/gatk instead
  ☆33Updated 7 years ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆61Updated 6 years ago
• Intel-HLS / GenomicsDB
  GenomicsDB
  ☆111Updated 2 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆77Updated 8 months ago
• roryk / tiny-test-data
  Super small biological datasets for unit testing
  ☆60Updated 5 years ago
• KHP-Informatics / ngseasy
  Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)
  ☆87Updated 7 years ago
• Illumina / interop
  C++ Library to parse Illumina InterOp files
  ☆75Updated last week
• GenomicsDB / GenomicsDB
  High performance data storage for importing, querying and transforming variants.
  ☆98Updated last month
• lh3 / bgt
  Flexible genotype query among 30,000+ samples whole-genome
  ☆96Updated 5 years ago
• liyao001 / BioQueue
  A novel pipeline framework to accelerate bioinformatics analysis
  ☆29Updated 2 years ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆85Updated 3 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆97Updated last year
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• ga4gh / task-execution-server
  ☆11Updated 8 years ago
• sbg / okAPI
  Recipes and Tutorials for Automation & Extension on the CGC and SBPLAT platforms
  ☆3Updated 3 years ago
• CCDG / Pipeline-Standardization
  ☆82Updated 6 years ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆53Updated this week
• konradjk / exac_browser
  Browser for ExAC consortium data
  ☆106Updated 3 years ago
• sequencing / isaac_variant_caller
  This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka
  ☆37Updated 8 years ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆99Updated 4 months ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 2 years ago
• arq5x / grabix
  a wee tool for random access into BGZF files.
  ☆84Updated 6 years ago
• CGATOxford / cgat
  Do not use - please refer to our newest code: https://github.com/cgat-developers/cgat-apps
  ☆124Updated 6 years ago