rabix / bunnyLinks
[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
☆74Updated 4 years ago
Alternatives and similar repositories for bunny
Users that are interested in bunny are comparing it to the libraries listed below
Sorting:
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆219Updated 2 years ago
- An app store for scientific workflows, tools, notebooks, and services☆130Updated this week
- SevenBridges Python Api bindings☆46Updated 6 months ago
- GenomicsDB☆111Updated 2 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆67Updated 5 years ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆87Updated 10 months ago
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- MyVariant.info: A BioThings API for human variant annotations☆95Updated 3 weeks ago
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- Flexible genotype query among 30,000+ samples whole-genome☆95Updated 5 years ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 6 years ago
- DNAnexus platform client libraries☆98Updated last week
- A novel pipeline framework to accelerate bioinformatics analysis☆30Updated 2 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆42Updated this week
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆69Updated 5 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated last week
- ☆27Updated 2 years ago
- A genotype query interface.☆136Updated 4 years ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated last month
- GA4GH Variation Representation Python Implementation☆59Updated this week
- De novo assembly based variant calling pipeline for Illumina short reads☆108Updated 4 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆61Updated last week