ga4gh / workflow-execution-service-schemas
The WES API is a standard way to run and manage portable workflows.
☆85Updated 7 months ago
Alternatives and similar repositories for workflow-execution-service-schemas
Users that are interested in workflow-execution-service-schemas are comparing it to the libraries listed below
Sorting:
- ☆84Updated 2 months ago
- GA4GH Variation Representation Python Implementation☆56Updated 2 weeks ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 10 months ago
- A Python library for interacting with the Galaxy API☆90Updated last week
- WDL plugin for pytest☆48Updated last year
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated last month
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆18Updated 2 years ago
- A repository for the schemas used for the Data Repository Service.☆61Updated last month
- An app store for scientific workflows, tools, notebooks, and services☆125Updated this week
- Python utilities for CWL☆39Updated 2 months ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 6 months ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated 6 months ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆78Updated last month
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last month
- non-redundant, compressed, journalled, file-based storage for biological sequences☆41Updated last month
- Nextflow Tower system☆150Updated 3 months ago
- Workflow Description Language developer tools & local runner☆188Updated 2 weeks ago
- Rich IDE support for Workflow Description Language☆42Updated last month
- Extensible specification for representing and uniquely identifying biological sequence variation☆88Updated last month
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆22Updated 2 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated this week
- Trigger CWL workflows via GA4GH WES and TES☆17Updated 2 months ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆22Updated 4 months ago
- Server wrapper that turns command line tools into web services☆61Updated 6 years ago
- A collection of reusable WDL tasks. Category:Other☆87Updated 2 weeks ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆43Updated last year
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆41Updated 4 months ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago