h3abionet / h3abionet16SLinks
H3ABioNet 16S rDNA diverstity analysis package
☆19Updated 6 years ago
Alternatives and similar repositories for h3abionet16S
Users that are interested in h3abionet16S are comparing it to the libraries listed below
Sorting:
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆25Updated 4 years ago
- ☆13Updated 8 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated last month
- Allele frequency filtering for Mendelian variant discovery☆18Updated 9 years ago
- PopSTR - A Population based microsatellite genotyper☆33Updated 2 years ago
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 6 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Updated 9 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Updated 5 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- reference free variant assembly☆34Updated 2 years ago
- extract SV signal from a BAM☆11Updated 7 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 6 years ago
- Nextflow implementation of the GATK HaplotypeCaller pipeline☆13Updated this week
- Recommended Graphtyper pipelines☆15Updated 4 years ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆16Updated 4 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- ☆29Updated 6 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- Pipeline for poreathon☆14Updated 11 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- 🍶 Genome assembly with short sequence reads☆25Updated last year
- Unfazed by genomic variant phasing☆27Updated last year
- Reducing reference bias using multiple population reference genomes☆34Updated last year