common-workflow-library / legacyLinks
Deprecated
☆101Updated 6 years ago
Alternatives and similar repositories for legacy
Users that are interested in legacy are comparing it to the libraries listed below
Sorting:
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- BigDataScript: Scirpting language for big data☆92Updated 4 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 6 years ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆106Updated 3 years ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Updated 8 years ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Updated 5 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆68Updated 5 years ago
- Python graph database framework for bioinformatics☆95Updated 4 years ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- WDL plugin for pytest☆48Updated 2 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 9 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆220Updated 3 years ago
- X things you should take into consideration if you code for big data analysis☆23Updated 7 years ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 6 years ago
- BioContainers specifications☆52Updated 2 years ago
- ☆93Updated 2 months ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆30Updated 5 years ago
- Request for comments on interchangeable bioinformatics containers☆39Updated 6 years ago
- Quality control methods for human genomic variants.☆61Updated 3 years ago
- workflow and resource management system for bioinformatics data analysis☆70Updated 5 years ago
- APIs for discovering genomics tools, their metadata and their containers☆34Updated 2 weeks ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 8 years ago
- Benchmarking toolkit for variant calling☆48Updated 5 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated last year
- [Bio in Docker] Symposium 2015☆21Updated 8 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencing☆22Updated 10 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- CloudBioLinux: configure virtual (or real) machines with tools for biological analyses☆257Updated 2 years ago