ParkinsonLab / MetaProLinks
☆22Updated this week
Alternatives and similar repositories for MetaPro
Users that are interested in MetaPro are comparing it to the libraries listed below
Sorting:
- Analysing Metagenomic Species (MGS)☆42Updated 4 years ago
- PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples☆45Updated 2 years ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆35Updated last month
- Set of utilities on sequences and BAM files☆26Updated 4 years ago
- ☆59Updated last year
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆22Updated last year
- A toolkit for prokaryotic comparative genomics☆51Updated last week
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated 2 months ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆62Updated 2 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆42Updated 5 years ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- Metagenomic Intra-Species Diversity Analysis (MIDAS)☆39Updated last year
- hecatomb is a virome analysis pipeline for analysis of Illumina sequence data☆59Updated last month
- Accurate metagenomi/metatranscriptomic analysis pipeline☆23Updated 4 years ago
- ☆32Updated 2 years ago
- Calculation of the Percentage of Conserved Proteins following Qin, Xie et al. 2014 but using DIAMOND instead of BLASTP for alignments.☆27Updated 6 months ago
- whole genome MLST analysis☆49Updated 4 months ago
- Discover and annotate the virome☆53Updated last week
- Bacterial GWAS analysis☆45Updated 3 months ago
- An algorithm for clustering metagenomic sequences.☆39Updated 6 months ago
- MAGScoT - a MAG scoring and refinement tool☆37Updated last year
- Scalable creating/updating of metagenome profiling databases☆62Updated 4 months ago
- ☆32Updated 9 months ago
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- KEGG Module Evaluation Tool☆31Updated last year
- ☆40Updated 4 years ago
- ☆62Updated last year
- ☆79Updated this week
- SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.☆24Updated last week
- Classify metagenomic contigs as eukaryotic or prokaryotic☆41Updated 2 years ago